Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Sec61a1P61620 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
Sec61a1P61620 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Gm13342-201ENSMUST00000121055 207 ntBASIC10.59□□□□□ -0.71
Sec61a1P61620 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Sec61a1P61620 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.59□□□□□ -0.71
Sec61a1P61620 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Sec61a1P61620 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.59□□□□□ -0.71
Sec61a1P61620 Gm43416-201ENSMUST00000201916 1015 ntBASIC10.59□□□□□ -0.71
Sec61a1P61620 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.59□□□□□ -0.71
Sec61a1P61620 Gm9368-201ENSMUST00000219348 831 ntBASIC10.59□□□□□ -0.71
Sec61a1P61620 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.59□□□□□ -0.71
Sec61a1P61620 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Sec61a1P61620 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Sec61a1P61620 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Sec61a1P61620 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Sec61a1P61620 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Sec61a1P61620 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.59□□□□□ -0.71
Sec61a1P61620 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.59□□□□□ -0.71
Sec61a1P61620 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.59□□□□□ -0.71
Sec61a1P61620 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.59□□□□□ -0.71
Sec61a1P61620 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.59□□□□□ -0.71
Sec61a1P61620 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.59□□□□□ -0.71
Sec61a1P61620 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a1P61620 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
Sec61a1P61620 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a1P61620 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a1P61620 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a1P61620 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a1P61620 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.58□□□□□ -0.72
Sec61a1P61620 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a1P61620 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a1P61620 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a1P61620 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Sec61a1P61620 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a1P61620 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a1P61620 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a1P61620 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a1P61620 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a1P61620 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a1P61620 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a1P61620 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a1P61620 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.58□□□□□ -0.72
Sec61a1P61620 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.58□□□□□ -0.72
Sec61a1P61620 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.58□□□□□ -0.72
Sec61a1P61620 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.58□□□□□ -0.72
Sec61a1P61620 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a1P61620 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a1P61620 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a1P61620 Gm2991-201ENSMUST00000173338 480 ntBASIC10.58□□□□□ -0.72
Sec61a1P61620 Gm7584-201ENSMUST00000175829 940 ntBASIC10.58□□□□□ -0.72
Sec61a1P61620 Gm37489-201ENSMUST00000191883 159 ntBASIC10.58□□□□□ -0.72
Sec61a1P61620 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC10.58□□□□□ -0.72
Sec61a1P61620 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.58□□□□□ -0.72
Sec61a1P61620 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.58□□□□□ -0.72
Sec61a1P61620 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.58□□□□□ -0.72
Sec61a1P61620 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a1P61620 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a1P61620 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Sec61a1P61620 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
Sec61a1P61620 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a1P61620 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Sec61a1P61620 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Sec61a1P61620 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
Sec61a1P61620 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a1P61620 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a1P61620 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a1P61620 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Sec61a1P61620 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.58□□□□□ -0.72
Sec61a1P61620 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a1P61620 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Sec61a1P61620 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a1P61620 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Sec61a1P61620 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.58□□□□□ -0.72
Sec61a1P61620 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms