Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp1P56183 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.51□□□□□ -0.25
Rrp1P56183 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp1P56183 Gm14441-201ENSMUST00000121960 540 ntBASIC13.51□□□□□ -0.25
Rrp1P56183 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp1P56183 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.51□□□□□ -0.25
Rrp1P56183 Gm25043-201ENSMUST00000158604 212 ntBASIC13.51□□□□□ -0.25
Rrp1P56183 Mir1938-201ENSMUST00000158746 100 ntBASIC13.51□□□□□ -0.25
Rrp1P56183 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp1P56183 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.51□□□□□ -0.25
Rrp1P56183 Gm27572-201ENSMUST00000183702 255 ntBASIC13.51□□□□□ -0.25
Rrp1P56183 Gm38241-201ENSMUST00000192641 898 ntBASIC13.51□□□□□ -0.25
Rrp1P56183 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC13.51□□□□□ -0.25
Rrp1P56183 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.51□□□□□ -0.25
Rrp1P56183 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.51□□□□□ -0.25
Rrp1P56183 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.51□□□□□ -0.25
Rrp1P56183 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp1P56183 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp1P56183 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Rrp1P56183 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp1P56183 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp1P56183 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.51□□□□□ -0.25
Rrp1P56183 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC13.51□□□□□ -0.25
Rrp1P56183 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Rrp1P56183 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.51□□□□□ -0.25
Rrp1P56183 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp1P56183 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp1P56183 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp1P56183 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp1P56183 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Rrp1P56183 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rrp1P56183 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rrp1P56183 Gm8146-201ENSMUST00000192106 1847 ntBASIC13.5□□□□□ -0.25
Rrp1P56183 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rrp1P56183 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rrp1P56183 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.5□□□□□ -0.25
Rrp1P56183 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC13.5□□□□□ -0.25
Rrp1P56183 Gm37931-201ENSMUST00000194686 2866 ntBASIC13.5□□□□□ -0.25
Rrp1P56183 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rrp1P56183 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rrp1P56183 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rrp1P56183 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Rrp1P56183 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rrp1P56183 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC13.5□□□□□ -0.25
Rrp1P56183 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rrp1P56183 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rrp1P56183 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rrp1P56183 Gm2546-201ENSMUST00000182630 991 ntBASIC13.5□□□□□ -0.25
Rrp1P56183 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.5□□□□□ -0.25
Rrp1P56183 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.5□□□□□ -0.25
Rrp1P56183 Gm37424-201ENSMUST00000191727 561 ntBASIC13.5□□□□□ -0.25
Rrp1P56183 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.5□□□□□ -0.25
Rrp1P56183 Gm43630-201ENSMUST00000201550 776 ntBASIC13.5□□□□□ -0.25
Rrp1P56183 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.5□□□□□ -0.25
Rrp1P56183 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.5□□□□□ -0.25
Rrp1P56183 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rrp1P56183 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rrp1P56183 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rrp1P56183 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rrp1P56183 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rrp1P56183 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rrp1P56183 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Rrp1P56183 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
Rrp1P56183 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rrp1P56183 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rrp1P56183 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Rrp1P56183 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.49□□□□□ -0.25
Rrp1P56183 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rrp1P56183 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.49□□□□□ -0.25
Rrp1P56183 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rrp1P56183 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rrp1P56183 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rrp1P56183 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rrp1P56183 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rrp1P56183 Gm12164-201ENSMUST00000121695 551 ntBASIC13.49□□□□□ -0.25
Rrp1P56183 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.49□□□□□ -0.25
Rrp1P56183 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rrp1P56183 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.49□□□□□ -0.25
Rrp1P56183 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.49□□□□□ -0.25
Rrp1P56183 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.49□□□□□ -0.25
Rrp1P56183 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.49□□□□□ -0.25
Rrp1P56183 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.49□□□□□ -0.25
Rrp1P56183 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rrp1P56183 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rrp1P56183 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.49□□□□□ -0.25
Rrp1P56183 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rrp1P56183 Gm10478-201ENSMUST00000084451 396 ntBASIC13.49□□□□□ -0.25
Rrp1P56183 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rrp1P56183 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rrp1P56183 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rrp1P56183 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rrp1P56183 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rrp1P56183 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rrp1P56183 Gm18986-201ENSMUST00000216029 1986 ntBASIC13.49□□□□□ -0.25
Rrp1P56183 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rrp1P56183 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Rrp1P56183 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC13.49□□□□□ -0.25
Rrp1P56183 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rrp1P56183 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rrp1P56183 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 140.3 ms