Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Cdh11P55288 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh11P55288 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Cdh11P55288 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh11P55288 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh11P55288 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh11P55288 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh11P55288 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Cdh11P55288 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh11P55288 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.95□□□□□ -0.66
Cdh11P55288 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Cdh11P55288 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cdh11P55288 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cdh11P55288 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.95□□□□□ -0.66
Cdh11P55288 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cdh11P55288 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Gm11222-201ENSMUST00000119005 738 ntBASIC10.95□□□□□ -0.66
Cdh11P55288 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cdh11P55288 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC10.95□□□□□ -0.66
Cdh11P55288 Gm13316-201ENSMUST00000140537 691 ntBASIC10.95□□□□□ -0.66
Cdh11P55288 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Gm38241-201ENSMUST00000192641 898 ntBASIC10.95□□□□□ -0.66
Cdh11P55288 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.95□□□□□ -0.66
Cdh11P55288 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Gm21769-201ENSMUST00000211922 111 ntBASIC10.95□□□□□ -0.66
Cdh11P55288 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Cdh11P55288 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Cdh11P55288 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cdh11P55288 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.95□□□□□ -0.66
Cdh11P55288 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.95□□□□□ -0.66
Cdh11P55288 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Cdh11P55288 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh11P55288 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.95□□□□□ -0.66
Cdh11P55288 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh11P55288 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.94□□□□□ -0.66
Cdh11P55288 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh11P55288 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh11P55288 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh11P55288 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh11P55288 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh11P55288 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh11P55288 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Cdh11P55288 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Cdh11P55288 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.94□□□□□ -0.66
Cdh11P55288 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh11P55288 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.94□□□□□ -0.66
Cdh11P55288 Gm26956-201ENSMUST00000182176 986 ntBASIC10.94□□□□□ -0.66
Cdh11P55288 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdh11P55288 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdh11P55288 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.94□□□□□ -0.66
Cdh11P55288 Gm37259-201ENSMUST00000193903 849 ntBASIC10.94□□□□□ -0.66
Cdh11P55288 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.94□□□□□ -0.66
Cdh11P55288 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdh11P55288 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh11P55288 Gm44882-201ENSMUST00000205702 802 ntBASIC10.94□□□□□ -0.66
Cdh11P55288 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh11P55288 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh11P55288 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh11P55288 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh11P55288 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh11P55288 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh11P55288 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh11P55288 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.94□□□□□ -0.66
Cdh11P55288 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh11P55288 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Cdh11P55288 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdh11P55288 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh11P55288 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh11P55288 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh11P55288 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms