Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Msh6P54276 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Msh6P54276 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh6P54276 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh6P54276 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh6P54276 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh6P54276 CT009489.1-201ENSMUST00000227740 1893 ntBASIC15.12■□□□□ 0.01
Msh6P54276 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Msh6P54276 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Msh6P54276 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Msh6P54276 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC15.12■□□□□ 0.01
Msh6P54276 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh6P54276 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh6P54276 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Msh6P54276 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Msh6P54276 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Msh6P54276 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
Msh6P54276 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh6P54276 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Msh6P54276 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Msh6P54276 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC15.11■□□□□ 0.01
Msh6P54276 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Msh6P54276 Gm3150-201ENSMUST00000166418 204 ntBASIC15.11■□□□□ 0.01
Msh6P54276 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh6P54276 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Msh6P54276 Gm45120-201ENSMUST00000208880 408 ntBASIC15.11■□□□□ 0.01
Msh6P54276 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC15.11■□□□□ 0.01
Msh6P54276 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC15.11■□□□□ 0.01
Msh6P54276 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Msh6P54276 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC15.11■□□□□ 0.01
Msh6P54276 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh6P54276 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh6P54276 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Msh6P54276 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh6P54276 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh6P54276 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Msh6P54276 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh6P54276 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh6P54276 AC093022.4-203ENSMUST00000228523 2657 ntBASIC15.11■□□□□ 0.01
Msh6P54276 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh6P54276 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Msh6P54276 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Msh6P54276 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh6P54276 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC15.11■□□□□ 0.01
Msh6P54276 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC15.11■□□□□ 0.01
Msh6P54276 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC15.11■□□□□ 0.01
Msh6P54276 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Msh6P54276 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh6P54276 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh6P54276 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh6P54276 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh6P54276 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Msh6P54276 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh6P54276 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh6P54276 Gm12990-201ENSMUST00000120372 468 ntBASIC15.11■□□□□ 0.01
Msh6P54276 Gm14219-201ENSMUST00000120414 288 ntBASIC15.11■□□□□ 0.01
Msh6P54276 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC15.11■□□□□ 0.01
Msh6P54276 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC15.11■□□□□ 0.01
Msh6P54276 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC15.11■□□□□ 0.01
Msh6P54276 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC15.11■□□□□ 0.01
Msh6P54276 Gm45113-201ENSMUST00000207518 165 ntBASIC15.11■□□□□ 0.01
Msh6P54276 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC15.11■□□□□ 0.01
Msh6P54276 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh6P54276 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh6P54276 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh6P54276 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh6P54276 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Msh6P54276 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Msh6P54276 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Msh6P54276 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh6P54276 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh6P54276 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh6P54276 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh6P54276 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh6P54276 Gm37859-201ENSMUST00000195529 2173 ntBASIC15.1■□□□□ 0.01
Msh6P54276 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC15.1■□□□□ 0.01
Msh6P54276 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh6P54276 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Msh6P54276 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Msh6P54276 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Msh6P54276 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh6P54276 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Msh6P54276 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh6P54276 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh6P54276 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh6P54276 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh6P54276 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh6P54276 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Msh6P54276 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh6P54276 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh6P54276 Gm12419-201ENSMUST00000116649 636 ntBASIC15.1■□□□□ 0.01
Msh6P54276 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC15.1■□□□□ 0.01
Msh6P54276 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC15.1■□□□□ 0.01
Msh6P54276 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC15.1■□□□□ 0.01
Msh6P54276 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Msh6P54276 Gm45594-201ENSMUST00000211717 241 ntBASIC15.1■□□□□ 0.01
Msh6P54276 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC15.1■□□□□ 0.01
Msh6P54276 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Msh6P54276 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Msh6P54276 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms