Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Gm15824-201ENSMUST00000119516 955 ntBASIC12.25□□□□□ -0.45
SftpbP50405 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SftpbP50405 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.25□□□□□ -0.45
SftpbP50405 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SftpbP50405 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.25□□□□□ -0.45
SftpbP50405 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.25□□□□□ -0.45
SftpbP50405 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SftpbP50405 Gm25043-201ENSMUST00000158604 212 ntBASIC12.25□□□□□ -0.45
SftpbP50405 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.25□□□□□ -0.45
SftpbP50405 Gm9136-201ENSMUST00000193368 454 ntBASIC12.25□□□□□ -0.45
SftpbP50405 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SftpbP50405 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.25□□□□□ -0.45
SftpbP50405 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SftpbP50405 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SftpbP50405 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SftpbP50405 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
SftpbP50405 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SftpbP50405 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SftpbP50405 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SftpbP50405 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SftpbP50405 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SftpbP50405 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SftpbP50405 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.25□□□□□ -0.45
SftpbP50405 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
SftpbP50405 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SftpbP50405 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SftpbP50405 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SftpbP50405 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SftpbP50405 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SftpbP50405 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.25□□□□□ -0.45
SftpbP50405 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SftpbP50405 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SftpbP50405 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SftpbP50405 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SftpbP50405 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SftpbP50405 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SftpbP50405 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SftpbP50405 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SftpbP50405 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.24□□□□□ -0.45
SftpbP50405 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SftpbP50405 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.24□□□□□ -0.45
SftpbP50405 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SftpbP50405 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SftpbP50405 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SftpbP50405 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
SftpbP50405 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
SftpbP50405 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SftpbP50405 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SftpbP50405 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SftpbP50405 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SftpbP50405 Gm11425-201ENSMUST00000119608 498 ntBASIC12.24□□□□□ -0.45
SftpbP50405 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.24□□□□□ -0.45
SftpbP50405 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SftpbP50405 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SftpbP50405 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.24□□□□□ -0.45
SftpbP50405 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SftpbP50405 Rprl1-201ENSMUST00000158050 327 ntBASIC12.24□□□□□ -0.45
SftpbP50405 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.24□□□□□ -0.45
SftpbP50405 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SftpbP50405 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SftpbP50405 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SftpbP50405 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.24□□□□□ -0.45
SftpbP50405 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.24□□□□□ -0.45
SftpbP50405 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SftpbP50405 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SftpbP50405 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.24□□□□□ -0.45
SftpbP50405 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.24□□□□□ -0.45
SftpbP50405 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SftpbP50405 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.24□□□□□ -0.45
SftpbP50405 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.24□□□□□ -0.45
SftpbP50405 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.24□□□□□ -0.45
SftpbP50405 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SftpbP50405 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SftpbP50405 Gm9396-201ENSMUST00000076703 567 ntBASIC12.24□□□□□ -0.45
SftpbP50405 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SftpbP50405 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SftpbP50405 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SftpbP50405 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SftpbP50405 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.24□□□□□ -0.45
SftpbP50405 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
SftpbP50405 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SftpbP50405 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SftpbP50405 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SftpbP50405 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SftpbP50405 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SftpbP50405 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SftpbP50405 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SftpbP50405 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SftpbP50405 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
SftpbP50405 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SftpbP50405 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SftpbP50405 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SftpbP50405 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.23□□□□□ -0.45
SftpbP50405 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SftpbP50405 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
SftpbP50405 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms