Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ercc3P49135 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Ercc3P49135 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ercc3P49135 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ercc3P49135 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ercc3P49135 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ercc3P49135 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ercc3P49135 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ercc3P49135 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ercc3P49135 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ercc3P49135 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC14.24□□□□□ -0.13
Ercc3P49135 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ercc3P49135 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ercc3P49135 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ercc3P49135 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ercc3P49135 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ercc3P49135 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Ercc3P49135 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ercc3P49135 Gm23200-201ENSMUST00000104379 132 ntBASIC14.24□□□□□ -0.13
Ercc3P49135 Gm14028-201ENSMUST00000117434 479 ntBASIC14.24□□□□□ -0.13
Ercc3P49135 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.24□□□□□ -0.13
Ercc3P49135 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Ercc3P49135 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ercc3P49135 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ercc3P49135 Gm16505-201ENSMUST00000179981 232 ntBASIC14.24□□□□□ -0.13
Ercc3P49135 Gm28450-201ENSMUST00000187349 638 ntBASIC14.24□□□□□ -0.13
Ercc3P49135 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.24□□□□□ -0.13
Ercc3P49135 Gm17931-201ENSMUST00000208132 634 ntBASIC14.24□□□□□ -0.13
Ercc3P49135 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.24□□□□□ -0.13
Ercc3P49135 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.24□□□□□ -0.13
Ercc3P49135 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ercc3P49135 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ercc3P49135 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ercc3P49135 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ercc3P49135 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ercc3P49135 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ercc3P49135 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ercc3P49135 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ercc3P49135 Gm37348-201ENSMUST00000193104 1789 ntBASIC14.24□□□□□ -0.13
Ercc3P49135 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ercc3P49135 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ercc3P49135 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Ercc3P49135 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ercc3P49135 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ercc3P49135 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ercc3P49135 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ercc3P49135 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ercc3P49135 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC14.23□□□□□ -0.13
Ercc3P49135 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ercc3P49135 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14.23□□□□□ -0.13
Ercc3P49135 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.23□□□□□ -0.13
Ercc3P49135 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ercc3P49135 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ercc3P49135 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ercc3P49135 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ercc3P49135 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Ercc3P49135 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ercc3P49135 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ercc3P49135 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ercc3P49135 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ercc3P49135 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ercc3P49135 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.23□□□□□ -0.13
Ercc3P49135 Gm5616-201ENSMUST00000165252 384 ntBASIC14.23□□□□□ -0.13
Ercc3P49135 Gm8741-201ENSMUST00000174736 384 ntBASIC14.23□□□□□ -0.13
Ercc3P49135 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.23□□□□□ -0.13
Ercc3P49135 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.23□□□□□ -0.13
Ercc3P49135 Gm29615-201ENSMUST00000185371 697 ntBASIC14.23□□□□□ -0.13
Ercc3P49135 Gm28224-201ENSMUST00000186078 697 ntBASIC14.23□□□□□ -0.13
Ercc3P49135 Gm29001-201ENSMUST00000186177 697 ntBASIC14.23□□□□□ -0.13
Ercc3P49135 Gm28292-201ENSMUST00000186593 697 ntBASIC14.23□□□□□ -0.13
Ercc3P49135 Gm28101-201ENSMUST00000187608 697 ntBASIC14.23□□□□□ -0.13
Ercc3P49135 Gm29076-201ENSMUST00000187689 697 ntBASIC14.23□□□□□ -0.13
Ercc3P49135 Gm28302-201ENSMUST00000187931 697 ntBASIC14.23□□□□□ -0.13
Ercc3P49135 Gm28646-201ENSMUST00000188220 697 ntBASIC14.23□□□□□ -0.13
Ercc3P49135 Gm28205-201ENSMUST00000189177 697 ntBASIC14.23□□□□□ -0.13
Ercc3P49135 Gm29032-201ENSMUST00000189797 697 ntBASIC14.23□□□□□ -0.13
Ercc3P49135 Gm28695-201ENSMUST00000190300 697 ntBASIC14.23□□□□□ -0.13
Ercc3P49135 Gm37448-201ENSMUST00000192795 697 ntBASIC14.23□□□□□ -0.13
Ercc3P49135 Gm9136-201ENSMUST00000193368 454 ntBASIC14.23□□□□□ -0.13
Ercc3P49135 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ercc3P49135 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ercc3P49135 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ercc3P49135 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ercc3P49135 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ercc3P49135 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ercc3P49135 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.23□□□□□ -0.13
Ercc3P49135 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.23□□□□□ -0.13
Ercc3P49135 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ercc3P49135 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ercc3P49135 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ercc3P49135 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ercc3P49135 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ercc3P49135 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ercc3P49135 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC14.23□□□□□ -0.13
Ercc3P49135 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.23□□□□□ -0.13
Ercc3P49135 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ercc3P49135 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.23□□□□□ -0.13
Ercc3P49135 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Ercc3P49135 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ercc3P49135 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms