Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
GdnfP48540 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
GdnfP48540 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
GdnfP48540 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
GdnfP48540 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.56□□□□□ -0.72
GdnfP48540 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
GdnfP48540 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.56□□□□□ -0.72
GdnfP48540 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
GdnfP48540 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.56□□□□□ -0.72
GdnfP48540 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
GdnfP48540 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.56□□□□□ -0.72
GdnfP48540 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
GdnfP48540 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
GdnfP48540 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
GdnfP48540 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
GdnfP48540 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.55□□□□□ -0.72
GdnfP48540 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.55□□□□□ -0.72
GdnfP48540 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.55□□□□□ -0.72
GdnfP48540 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.55□□□□□ -0.72
GdnfP48540 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.55□□□□□ -0.72
GdnfP48540 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.55□□□□□ -0.72
GdnfP48540 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
GdnfP48540 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.55□□□□□ -0.72
GdnfP48540 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Gm36943-201ENSMUST00000194422 282 ntBASIC10.55□□□□□ -0.72
GdnfP48540 Gm38092-201ENSMUST00000195600 653 ntBASIC10.55□□□□□ -0.72
GdnfP48540 Gm18062-201ENSMUST00000208020 547 ntBASIC10.55□□□□□ -0.72
GdnfP48540 Gm18055-201ENSMUST00000208254 547 ntBASIC10.55□□□□□ -0.72
GdnfP48540 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.55□□□□□ -0.72
GdnfP48540 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Snora73a-201ENSMUST00000082453 205 ntBASIC10.55□□□□□ -0.72
GdnfP48540 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
GdnfP48540 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
GdnfP48540 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
GdnfP48540 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC10.55□□□□□ -0.72
GdnfP48540 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
GdnfP48540 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
GdnfP48540 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
GdnfP48540 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.55□□□□□ -0.72
GdnfP48540 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
GdnfP48540 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
GdnfP48540 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
GdnfP48540 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
GdnfP48540 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
GdnfP48540 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.54□□□□□ -0.72
GdnfP48540 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
GdnfP48540 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.54□□□□□ -0.72
GdnfP48540 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
GdnfP48540 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
GdnfP48540 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
GdnfP48540 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
GdnfP48540 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
GdnfP48540 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
GdnfP48540 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
GdnfP48540 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
GdnfP48540 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
GdnfP48540 Gm22018-201ENSMUST00000104357 131 ntBASIC10.54□□□□□ -0.72
GdnfP48540 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
GdnfP48540 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
GdnfP48540 Gm14921-201ENSMUST00000118643 908 ntBASIC10.54□□□□□ -0.72
GdnfP48540 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.54□□□□□ -0.72
GdnfP48540 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.54□□□□□ -0.72
GdnfP48540 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.54□□□□□ -0.72
GdnfP48540 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.54□□□□□ -0.72
GdnfP48540 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
GdnfP48540 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC10.54□□□□□ -0.72
GdnfP48540 Gm16296-201ENSMUST00000159905 325 ntBASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms