Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HttP42859 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
HttP42859 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HttP42859 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HttP42859 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
HttP42859 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HttP42859 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HttP42859 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HttP42859 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
HttP42859 Snord23-201ENSMUST00000116828 109 ntBASIC12.35□□□□□ -0.43
HttP42859 Gm15610-201ENSMUST00000120584 195 ntBASIC12.35□□□□□ -0.43
HttP42859 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC12.35□□□□□ -0.43
HttP42859 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC12.35□□□□□ -0.43
HttP42859 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
HttP42859 Gm3635-201ENSMUST00000212314 354 ntBASIC12.35□□□□□ -0.43
HttP42859 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HttP42859 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
HttP42859 Krtap6-3-201ENSMUST00000079151 444 ntBASIC12.35□□□□□ -0.43
HttP42859 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
HttP42859 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
HttP42859 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HttP42859 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
HttP42859 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HttP42859 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
HttP42859 Mir598-201ENSMUST00000102094 79 ntBASIC12.35□□□□□ -0.43
HttP42859 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HttP42859 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
HttP42859 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
HttP42859 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HttP42859 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
HttP42859 Gm42660-201ENSMUST00000197733 947 ntBASIC12.35□□□□□ -0.43
HttP42859 Gm18391-201ENSMUST00000217189 658 ntBASIC12.35□□□□□ -0.43
HttP42859 AC102847.1-202ENSMUST00000226313 1245 ntBASIC12.35□□□□□ -0.43
HttP42859 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HttP42859 Gm4778-201ENSMUST00000098878 1098 ntBASIC12.35□□□□□ -0.43
HttP42859 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HttP42859 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HttP42859 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.34□□□□□ -0.43
HttP42859 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.34□□□□□ -0.43
HttP42859 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HttP42859 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HttP42859 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HttP42859 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.34□□□□□ -0.43
HttP42859 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HttP42859 Klf10-203ENSMUST00000227920 2144 ntBASIC12.34□□□□□ -0.43
HttP42859 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
HttP42859 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HttP42859 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
HttP42859 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HttP42859 Gm14441-201ENSMUST00000121960 540 ntBASIC12.34□□□□□ -0.43
HttP42859 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC12.34□□□□□ -0.43
HttP42859 Gm9701-201ENSMUST00000077976 427 ntBASIC12.34□□□□□ -0.43
HttP42859 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
HttP42859 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
HttP42859 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HttP42859 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
HttP42859 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HttP42859 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HttP42859 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HttP42859 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
HttP42859 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
HttP42859 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
HttP42859 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HttP42859 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HttP42859 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HttP42859 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC12.34□□□□□ -0.43
HttP42859 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
HttP42859 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
HttP42859 Gm36980-201ENSMUST00000195643 622 ntBASIC12.34□□□□□ -0.43
HttP42859 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HttP42859 Gm44540-201ENSMUST00000205640 354 ntBASIC12.34□□□□□ -0.43
HttP42859 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.34□□□□□ -0.43
HttP42859 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
HttP42859 AC102523.1-201ENSMUST00000228706 1144 ntBASIC12.34□□□□□ -0.43
HttP42859 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
HttP42859 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
HttP42859 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
HttP42859 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
HttP42859 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
HttP42859 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HttP42859 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HttP42859 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.34□□□□□ -0.43
HttP42859 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
HttP42859 Gm6758-201ENSMUST00000119643 1055 ntBASIC12.33□□□□□ -0.44
HttP42859 Gm26047-201ENSMUST00000157308 113 ntBASIC12.33□□□□□ -0.44
HttP42859 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HttP42859 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC12.33□□□□□ -0.44
HttP42859 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC12.33□□□□□ -0.44
HttP42859 Gm26047-202ENSMUST00000198840 115 ntBASIC12.33□□□□□ -0.44
HttP42859 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HttP42859 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC12.33□□□□□ -0.44
HttP42859 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC12.33□□□□□ -0.44
HttP42859 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HttP42859 Paupar-201ENSMUST00000194826 3482 ntBASIC12.33□□□□□ -0.44
HttP42859 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
HttP42859 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HttP42859 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HttP42859 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HttP42859 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HttP42859 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms