Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Gm11660-201ENSMUST00000120955 412 ntBASIC10.98□□□□□ -0.65
Nkx2-2P42586 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.98□□□□□ -0.65
Nkx2-2P42586 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Gm27627-201ENSMUST00000183644 150 ntBASIC10.98□□□□□ -0.65
Nkx2-2P42586 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.98□□□□□ -0.65
Nkx2-2P42586 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Gm17827-201ENSMUST00000211825 742 ntBASIC10.98□□□□□ -0.65
Nkx2-2P42586 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.98□□□□□ -0.65
Nkx2-2P42586 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Gm5705-201ENSMUST00000066241 711 ntBASIC10.98□□□□□ -0.65
Nkx2-2P42586 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.98□□□□□ -0.65
Nkx2-2P42586 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Nkx2-2P42586 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-2P42586 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.97□□□□□ -0.65
Nkx2-2P42586 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Gm8343-201ENSMUST00000182705 994 ntBASIC10.97□□□□□ -0.65
Nkx2-2P42586 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.97□□□□□ -0.65
Nkx2-2P42586 Gm29615-201ENSMUST00000185371 697 ntBASIC10.97□□□□□ -0.65
Nkx2-2P42586 Gm28224-201ENSMUST00000186078 697 ntBASIC10.97□□□□□ -0.65
Nkx2-2P42586 Gm29001-201ENSMUST00000186177 697 ntBASIC10.97□□□□□ -0.65
Nkx2-2P42586 Gm28292-201ENSMUST00000186593 697 ntBASIC10.97□□□□□ -0.65
Nkx2-2P42586 Gm28101-201ENSMUST00000187608 697 ntBASIC10.97□□□□□ -0.65
Nkx2-2P42586 Gm29076-201ENSMUST00000187689 697 ntBASIC10.97□□□□□ -0.65
Nkx2-2P42586 Gm28302-201ENSMUST00000187931 697 ntBASIC10.97□□□□□ -0.65
Nkx2-2P42586 Gm28646-201ENSMUST00000188220 697 ntBASIC10.97□□□□□ -0.65
Nkx2-2P42586 Gm28205-201ENSMUST00000189177 697 ntBASIC10.97□□□□□ -0.65
Nkx2-2P42586 Gm29032-201ENSMUST00000189797 697 ntBASIC10.97□□□□□ -0.65
Nkx2-2P42586 Gm28695-201ENSMUST00000190300 697 ntBASIC10.97□□□□□ -0.65
Nkx2-2P42586 Gm37448-201ENSMUST00000192795 697 ntBASIC10.97□□□□□ -0.65
Nkx2-2P42586 Gm37666-201ENSMUST00000194110 866 ntBASIC10.97□□□□□ -0.65
Nkx2-2P42586 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.97□□□□□ -0.65
Nkx2-2P42586 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.97□□□□□ -0.65
Nkx2-2P42586 Gm44262-201ENSMUST00000204969 372 ntBASIC10.97□□□□□ -0.65
Nkx2-2P42586 Gm45433-201ENSMUST00000209386 247 ntBASIC10.97□□□□□ -0.65
Nkx2-2P42586 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Nkx2-2P42586 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms