Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fen1P39749 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fen1P39749 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fen1P39749 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fen1P39749 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fen1P39749 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fen1P39749 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Fen1P39749 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fen1P39749 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fen1P39749 Gm12957-201ENSMUST00000117835 377 ntBASIC12.07□□□□□ -0.48
Fen1P39749 Gm11814-201ENSMUST00000119515 929 ntBASIC12.07□□□□□ -0.48
Fen1P39749 Gm9083-201ENSMUST00000120423 819 ntBASIC12.07□□□□□ -0.48
Fen1P39749 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fen1P39749 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.07□□□□□ -0.48
Fen1P39749 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fen1P39749 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.07□□□□□ -0.48
Fen1P39749 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.07□□□□□ -0.48
Fen1P39749 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.07□□□□□ -0.48
Fen1P39749 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.07□□□□□ -0.48
Fen1P39749 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fen1P39749 Gm8652-201ENSMUST00000181363 964 ntBASIC12.07□□□□□ -0.48
Fen1P39749 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fen1P39749 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.07□□□□□ -0.48
Fen1P39749 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.07□□□□□ -0.48
Fen1P39749 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.07□□□□□ -0.48
Fen1P39749 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Fen1P39749 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fen1P39749 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fen1P39749 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fen1P39749 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Fen1P39749 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Fen1P39749 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Fen1P39749 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fen1P39749 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Fen1P39749 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fen1P39749 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Fen1P39749 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fen1P39749 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.07□□□□□ -0.48
Fen1P39749 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fen1P39749 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fen1P39749 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Fen1P39749 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Fen1P39749 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.06□□□□□ -0.48
Fen1P39749 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Fen1P39749 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Fen1P39749 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.06□□□□□ -0.48
Fen1P39749 Gm13315-201ENSMUST00000120376 991 ntBASIC12.06□□□□□ -0.48
Fen1P39749 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.06□□□□□ -0.48
Fen1P39749 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Fen1P39749 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Fen1P39749 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fen1P39749 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fen1P39749 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Fen1P39749 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fen1P39749 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fen1P39749 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fen1P39749 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fen1P39749 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.05□□□□□ -0.48
Fen1P39749 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Fen1P39749 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fen1P39749 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fen1P39749 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fen1P39749 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fen1P39749 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fen1P39749 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.05□□□□□ -0.48
Fen1P39749 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fen1P39749 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms