Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.82□□□□□ -0.52
ClppO88696 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClppO88696 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ClppO88696 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClppO88696 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClppO88696 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClppO88696 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
ClppO88696 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClppO88696 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClppO88696 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClppO88696 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClppO88696 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
ClppO88696 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClppO88696 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClppO88696 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClppO88696 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClppO88696 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
ClppO88696 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClppO88696 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClppO88696 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ClppO88696 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
ClppO88696 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClppO88696 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.81□□□□□ -0.52
ClppO88696 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClppO88696 Gm5070-201ENSMUST00000177599 862 ntBASIC11.81□□□□□ -0.52
ClppO88696 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClppO88696 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClppO88696 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.81□□□□□ -0.52
ClppO88696 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.81□□□□□ -0.52
ClppO88696 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.81□□□□□ -0.52
ClppO88696 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClppO88696 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClppO88696 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.81□□□□□ -0.52
ClppO88696 Gm43999-201ENSMUST00000204286 2889 ntBASIC11.81□□□□□ -0.52
ClppO88696 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClppO88696 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
ClppO88696 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClppO88696 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClppO88696 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClppO88696 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClppO88696 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ClppO88696 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClppO88696 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClppO88696 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ClppO88696 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClppO88696 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClppO88696 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
ClppO88696 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClppO88696 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
ClppO88696 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClppO88696 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClppO88696 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClppO88696 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
ClppO88696 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClppO88696 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClppO88696 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClppO88696 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.8□□□□□ -0.52
ClppO88696 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClppO88696 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClppO88696 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClppO88696 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.8□□□□□ -0.52
ClppO88696 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ClppO88696 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.8□□□□□ -0.52
ClppO88696 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.8□□□□□ -0.52
ClppO88696 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.8□□□□□ -0.52
ClppO88696 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClppO88696 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.8□□□□□ -0.52
ClppO88696 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ClppO88696 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.8□□□□□ -0.52
ClppO88696 Gm9230-201ENSMUST00000188228 532 ntBASIC11.8□□□□□ -0.52
ClppO88696 Gm45433-201ENSMUST00000209386 247 ntBASIC11.8□□□□□ -0.52
ClppO88696 Gm8913-201ENSMUST00000209491 641 ntBASIC11.8□□□□□ -0.52
ClppO88696 Gzmn-202ENSMUST00000225535 989 ntBASIC11.8□□□□□ -0.52
ClppO88696 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClppO88696 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ClppO88696 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClppO88696 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClppO88696 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
ClppO88696 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
ClppO88696 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClppO88696 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClppO88696 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
ClppO88696 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ClppO88696 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
ClppO88696 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClppO88696 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
ClppO88696 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ClppO88696 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClppO88696 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClppO88696 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClppO88696 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
ClppO88696 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
ClppO88696 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.8□□□□□ -0.52
ClppO88696 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ClppO88696 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
ClppO88696 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClppO88696 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
ClppO88696 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClppO88696 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClppO88696 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 131.7 ms