Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac1O09106 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Hdac1O09106 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac1O09106 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac1O09106 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac1O09106 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac1O09106 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Hdac1O09106 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.23□□□□□ -0.13
Hdac1O09106 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac1O09106 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hdac1O09106 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC14.23□□□□□ -0.13
Hdac1O09106 Gm10434-201ENSMUST00000101158 471 ntBASIC14.23□□□□□ -0.13
Hdac1O09106 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac1O09106 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.23□□□□□ -0.13
Hdac1O09106 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC14.23□□□□□ -0.13
Hdac1O09106 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac1O09106 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.23□□□□□ -0.13
Hdac1O09106 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.23□□□□□ -0.13
Hdac1O09106 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.23□□□□□ -0.13
Hdac1O09106 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC14.23□□□□□ -0.13
Hdac1O09106 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.23□□□□□ -0.13
Hdac1O09106 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.23□□□□□ -0.13
Hdac1O09106 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac1O09106 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Hdac1O09106 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Hdac1O09106 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac1O09106 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac1O09106 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac1O09106 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac1O09106 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC14.23□□□□□ -0.13
Hdac1O09106 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac1O09106 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac1O09106 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac1O09106 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hdac1O09106 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.23□□□□□ -0.13
Hdac1O09106 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.23□□□□□ -0.13
Hdac1O09106 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Hdac1O09106 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac1O09106 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac1O09106 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac1O09106 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac1O09106 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.23□□□□□ -0.13
Hdac1O09106 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC14.23□□□□□ -0.13
Hdac1O09106 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac1O09106 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hdac1O09106 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac1O09106 AC165351.1-201ENSMUST00000219078 2020 ntBASIC14.22□□□□□ -0.13
Hdac1O09106 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac1O09106 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac1O09106 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac1O09106 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac1O09106 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hdac1O09106 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac1O09106 Gm23931-201ENSMUST00000103842 109 ntBASIC14.22□□□□□ -0.13
Hdac1O09106 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac1O09106 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.22□□□□□ -0.13
Hdac1O09106 Gm11960-201ENSMUST00000122068 925 ntBASIC14.22□□□□□ -0.13
Hdac1O09106 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC14.22□□□□□ -0.13
Hdac1O09106 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac1O09106 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Hdac1O09106 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac1O09106 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac1O09106 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC14.22□□□□□ -0.13
Hdac1O09106 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC14.22□□□□□ -0.13
Hdac1O09106 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.22□□□□□ -0.13
Hdac1O09106 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.22□□□□□ -0.13
Hdac1O09106 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.22□□□□□ -0.13
Hdac1O09106 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.22□□□□□ -0.13
Hdac1O09106 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac1O09106 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Hdac1O09106 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac1O09106 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac1O09106 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Hdac1O09106 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac1O09106 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac1O09106 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC14.22□□□□□ -0.13
Hdac1O09106 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac1O09106 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Hdac1O09106 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Hdac1O09106 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Hdac1O09106 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hdac1O09106 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hdac1O09106 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.21□□□□□ -0.13
Hdac1O09106 Gm5859-201ENSMUST00000165401 2324 ntBASIC14.21□□□□□ -0.13
Hdac1O09106 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hdac1O09106 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hdac1O09106 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hdac1O09106 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hdac1O09106 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hdac1O09106 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Hdac1O09106 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hdac1O09106 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hdac1O09106 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hdac1O09106 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hdac1O09106 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hdac1O09106 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hdac1O09106 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hdac1O09106 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hdac1O09106 Gm25214-201ENSMUST00000104573 129 ntBASIC14.21□□□□□ -0.13
Hdac1O09106 Gm13226-201ENSMUST00000117838 404 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms