Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Gm13392-201ENSMUST00000117708 150 ntBASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Gm6023-201ENSMUST00000118217 606 ntBASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Gm43118-201ENSMUST00000199149 775 ntBASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Gm18054-201ENSMUST00000207539 555 ntBASIC12.06□□□□□ -0.48
Gm28043E0CXC2 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Gm10478-201ENSMUST00000084451 396 ntBASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Gm14760-201ENSMUST00000121831 999 ntBASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Gm22119-201ENSMUST00000175594 99 ntBASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Gm42599-201ENSMUST00000201308 469 ntBASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.05□□□□□ -0.48
Gm28043E0CXC2 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Gm45880-201ENSMUST00000213041 853 ntBASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm28043E0CXC2 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.04□□□□□ -0.48
Gm28043E0CXC2 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms