Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.66■□□□□ 0.9
Cstf1Q99LC2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cstf1Q99LC2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cstf1Q99LC2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Cstf1Q99LC2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cstf1Q99LC2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Cstf1Q99LC2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cstf1Q99LC2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cstf1Q99LC2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cstf1Q99LC2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cstf1Q99LC2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cstf1Q99LC2 Gm10493-201ENSMUST00000097270 612 ntBASIC20.65■□□□□ 0.9
Cstf1Q99LC2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cstf1Q99LC2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Cstf1Q99LC2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cstf1Q99LC2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cstf1Q99LC2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.64■□□□□ 0.89
Cstf1Q99LC2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
Cstf1Q99LC2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Cstf1Q99LC2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cstf1Q99LC2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.64■□□□□ 0.89
Cstf1Q99LC2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cstf1Q99LC2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cstf1Q99LC2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cstf1Q99LC2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cstf1Q99LC2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Cstf1Q99LC2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cstf1Q99LC2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cstf1Q99LC2 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.63■□□□□ 0.89
Cstf1Q99LC2 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.63■□□□□ 0.89
Cstf1Q99LC2 Gm42642-201ENSMUST00000200683 355 ntBASIC20.63■□□□□ 0.89
Cstf1Q99LC2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.63■□□□□ 0.89
Cstf1Q99LC2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cstf1Q99LC2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Cstf1Q99LC2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cstf1Q99LC2 Gm26833-201ENSMUST00000180899 440 ntBASIC20.62■□□□□ 0.89
Cstf1Q99LC2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cstf1Q99LC2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cstf1Q99LC2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cstf1Q99LC2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cstf1Q99LC2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cstf1Q99LC2 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cstf1Q99LC2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cstf1Q99LC2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cstf1Q99LC2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cstf1Q99LC2 Gm12251-201ENSMUST00000117893 792 ntBASIC20.61■□□□□ 0.89
Cstf1Q99LC2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cstf1Q99LC2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cstf1Q99LC2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Cstf1Q99LC2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.6■□□□□ 0.89
Cstf1Q99LC2 Gm43060-201ENSMUST00000200621 289 ntBASIC20.6■□□□□ 0.89
Cstf1Q99LC2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.6■□□□□ 0.89
Cstf1Q99LC2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.6■□□□□ 0.89
Cstf1Q99LC2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cstf1Q99LC2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Cstf1Q99LC2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.6■□□□□ 0.89
Cstf1Q99LC2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cstf1Q99LC2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cstf1Q99LC2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Cstf1Q99LC2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cstf1Q99LC2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cstf1Q99LC2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cstf1Q99LC2 Gm27011-201ENSMUST00000182352 972 ntBASIC20.59■□□□□ 0.89
Cstf1Q99LC2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cstf1Q99LC2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Cstf1Q99LC2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cstf1Q99LC2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cstf1Q99LC2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cstf1Q99LC2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cstf1Q99LC2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cstf1Q99LC2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cstf1Q99LC2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.58■□□□□ 0.89
Cstf1Q99LC2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cstf1Q99LC2 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.58■□□□□ 0.88
Cstf1Q99LC2 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cstf1Q99LC2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cstf1Q99LC2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Cstf1Q99LC2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Cstf1Q99LC2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Cstf1Q99LC2 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.57■□□□□ 0.88
Cstf1Q99LC2 Gm37179-201ENSMUST00000194862 823 ntBASIC20.57■□□□□ 0.88
Cstf1Q99LC2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cstf1Q99LC2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cstf1Q99LC2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cstf1Q99LC2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.57■□□□□ 0.88
Cstf1Q99LC2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cstf1Q99LC2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cstf1Q99LC2 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.56■□□□□ 0.88
Cstf1Q99LC2 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.56■□□□□ 0.88
Cstf1Q99LC2 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.56■□□□□ 0.88
Cstf1Q99LC2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cstf1Q99LC2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cstf1Q99LC2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cstf1Q99LC2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cstf1Q99LC2 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.56■□□□□ 0.88
Cstf1Q99LC2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cstf1Q99LC2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.56■□□□□ 0.88
Cstf1Q99LC2 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cstf1Q99LC2 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cstf1Q99LC2 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms