Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkd2Q8VE28 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkd2Q8VE28 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Nkd2Q8VE28 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkd2Q8VE28 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Nkd2Q8VE28 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nkd2Q8VE28 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkd2Q8VE28 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkd2Q8VE28 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.74■□□□□ 0.59
Nkd2Q8VE28 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkd2Q8VE28 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.73■□□□□ 0.59
Nkd2Q8VE28 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkd2Q8VE28 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkd2Q8VE28 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkd2Q8VE28 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkd2Q8VE28 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkd2Q8VE28 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkd2Q8VE28 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkd2Q8VE28 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkd2Q8VE28 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.73■□□□□ 0.59
Nkd2Q8VE28 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nkd2Q8VE28 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nkd2Q8VE28 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkd2Q8VE28 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkd2Q8VE28 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkd2Q8VE28 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkd2Q8VE28 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nkd2Q8VE28 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Nkd2Q8VE28 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Nkd2Q8VE28 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.72■□□□□ 0.59
Nkd2Q8VE28 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkd2Q8VE28 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Nkd2Q8VE28 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkd2Q8VE28 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Nkd2Q8VE28 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkd2Q8VE28 Gm9847-201ENSMUST00000052528 599 ntBASIC18.72■□□□□ 0.59
Nkd2Q8VE28 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkd2Q8VE28 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nkd2Q8VE28 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkd2Q8VE28 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.71■□□□□ 0.59
Nkd2Q8VE28 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Nkd2Q8VE28 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkd2Q8VE28 Gm22238-201ENSMUST00000175222 88 ntBASIC18.71■□□□□ 0.59
Nkd2Q8VE28 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkd2Q8VE28 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nkd2Q8VE28 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nkd2Q8VE28 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Nkd2Q8VE28 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.7■□□□□ 0.58
Nkd2Q8VE28 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.7■□□□□ 0.58
Nkd2Q8VE28 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.7■□□□□ 0.58
Nkd2Q8VE28 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.7■□□□□ 0.58
Nkd2Q8VE28 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkd2Q8VE28 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkd2Q8VE28 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Nkd2Q8VE28 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkd2Q8VE28 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkd2Q8VE28 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nkd2Q8VE28 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkd2Q8VE28 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkd2Q8VE28 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Nkd2Q8VE28 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nkd2Q8VE28 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkd2Q8VE28 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nkd2Q8VE28 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Nkd2Q8VE28 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nkd2Q8VE28 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.68■□□□□ 0.58
Nkd2Q8VE28 Gm10399-202ENSMUST00000202768 748 ntBASIC18.68■□□□□ 0.58
Nkd2Q8VE28 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.68■□□□□ 0.58
Nkd2Q8VE28 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.68■□□□□ 0.58
Nkd2Q8VE28 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Nkd2Q8VE28 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkd2Q8VE28 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkd2Q8VE28 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkd2Q8VE28 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkd2Q8VE28 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nkd2Q8VE28 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Nkd2Q8VE28 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkd2Q8VE28 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Nkd2Q8VE28 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkd2Q8VE28 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.67■□□□□ 0.58
Nkd2Q8VE28 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkd2Q8VE28 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Nkd2Q8VE28 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nkd2Q8VE28 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkd2Q8VE28 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.67■□□□□ 0.58
Nkd2Q8VE28 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkd2Q8VE28 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nkd2Q8VE28 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.67■□□□□ 0.58
Nkd2Q8VE28 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.67■□□□□ 0.58
Nkd2Q8VE28 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nkd2Q8VE28 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkd2Q8VE28 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nkd2Q8VE28 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.66■□□□□ 0.58
Nkd2Q8VE28 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkd2Q8VE28 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkd2Q8VE28 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkd2Q8VE28 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nkd2Q8VE28 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkd2Q8VE28 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkd2Q8VE28 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms