Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sgms1Q8VCQ6 Gm15820-201ENSMUST00000201566 728 ntBASIC22.41■■□□□ 1.18
Sgms1Q8VCQ6 Gm10399-202ENSMUST00000202768 748 ntBASIC22.41■■□□□ 1.18
Sgms1Q8VCQ6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Sgms1Q8VCQ6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.41■■□□□ 1.18
Sgms1Q8VCQ6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sgms1Q8VCQ6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sgms1Q8VCQ6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Sgms1Q8VCQ6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sgms1Q8VCQ6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sgms1Q8VCQ6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.4■■□□□ 1.18
Sgms1Q8VCQ6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
Sgms1Q8VCQ6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sgms1Q8VCQ6 Gm10232-201ENSMUST00000089221 720 ntBASIC22.4■■□□□ 1.18
Sgms1Q8VCQ6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sgms1Q8VCQ6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Sgms1Q8VCQ6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC22.4■■□□□ 1.18
Sgms1Q8VCQ6 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Sgms1Q8VCQ6 Hsf1-207ENSMUST00000228371 2102 ntBASIC22.39■■□□□ 1.18
Sgms1Q8VCQ6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Sgms1Q8VCQ6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sgms1Q8VCQ6 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Sgms1Q8VCQ6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sgms1Q8VCQ6 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sgms1Q8VCQ6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sgms1Q8VCQ6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Sgms1Q8VCQ6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Sgms1Q8VCQ6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.38■■□□□ 1.17
Sgms1Q8VCQ6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sgms1Q8VCQ6 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.38■■□□□ 1.17
Sgms1Q8VCQ6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sgms1Q8VCQ6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Sgms1Q8VCQ6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sgms1Q8VCQ6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sgms1Q8VCQ6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sgms1Q8VCQ6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC22.37■■□□□ 1.17
Sgms1Q8VCQ6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Sgms1Q8VCQ6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC22.37■■□□□ 1.17
Sgms1Q8VCQ6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sgms1Q8VCQ6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC22.37■■□□□ 1.17
Sgms1Q8VCQ6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Sgms1Q8VCQ6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sgms1Q8VCQ6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sgms1Q8VCQ6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
Sgms1Q8VCQ6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.36■■□□□ 1.17
Sgms1Q8VCQ6 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Sgms1Q8VCQ6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Sgms1Q8VCQ6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Sgms1Q8VCQ6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sgms1Q8VCQ6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sgms1Q8VCQ6 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Sgms1Q8VCQ6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.35■■□□□ 1.17
Sgms1Q8VCQ6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sgms1Q8VCQ6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sgms1Q8VCQ6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sgms1Q8VCQ6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
Sgms1Q8VCQ6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Sgms1Q8VCQ6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sgms1Q8VCQ6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sgms1Q8VCQ6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sgms1Q8VCQ6 Snhg20-203ENSMUST00000182811 2153 ntBASIC22.34■■□□□ 1.17
Sgms1Q8VCQ6 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sgms1Q8VCQ6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC22.34■■□□□ 1.17
Sgms1Q8VCQ6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sgms1Q8VCQ6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sgms1Q8VCQ6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
Sgms1Q8VCQ6 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sgms1Q8VCQ6 Gm4430-201ENSMUST00000192413 1943 ntBASIC22.33■■□□□ 1.17
Sgms1Q8VCQ6 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sgms1Q8VCQ6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sgms1Q8VCQ6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.33■■□□□ 1.17
Sgms1Q8VCQ6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Sgms1Q8VCQ6 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sgms1Q8VCQ6 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Sgms1Q8VCQ6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Sgms1Q8VCQ6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sgms1Q8VCQ6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sgms1Q8VCQ6 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sgms1Q8VCQ6 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sgms1Q8VCQ6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Sgms1Q8VCQ6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Sgms1Q8VCQ6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sgms1Q8VCQ6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sgms1Q8VCQ6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sgms1Q8VCQ6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sgms1Q8VCQ6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Sgms1Q8VCQ6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC22.31■■□□□ 1.16
Sgms1Q8VCQ6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sgms1Q8VCQ6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sgms1Q8VCQ6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Sgms1Q8VCQ6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sgms1Q8VCQ6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sgms1Q8VCQ6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sgms1Q8VCQ6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
Sgms1Q8VCQ6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sgms1Q8VCQ6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Sgms1Q8VCQ6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC22.3■■□□□ 1.16
Sgms1Q8VCQ6 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sgms1Q8VCQ6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Sgms1Q8VCQ6 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms