Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.71■□□□□ 0.75
Hmgcs1Q8JZK9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmgcs1Q8JZK9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmgcs1Q8JZK9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmgcs1Q8JZK9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hmgcs1Q8JZK9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hmgcs1Q8JZK9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmgcs1Q8JZK9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmgcs1Q8JZK9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.7■□□□□ 0.74
Hmgcs1Q8JZK9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmgcs1Q8JZK9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmgcs1Q8JZK9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hmgcs1Q8JZK9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Hmgcs1Q8JZK9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmgcs1Q8JZK9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmgcs1Q8JZK9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmgcs1Q8JZK9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmgcs1Q8JZK9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Hmgcs1Q8JZK9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Hmgcs1Q8JZK9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hmgcs1Q8JZK9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hmgcs1Q8JZK9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmgcs1Q8JZK9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmgcs1Q8JZK9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmgcs1Q8JZK9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmgcs1Q8JZK9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.69■□□□□ 0.74
Hmgcs1Q8JZK9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmgcs1Q8JZK9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Hmgcs1Q8JZK9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.68■□□□□ 0.74
Hmgcs1Q8JZK9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.68■□□□□ 0.74
Hmgcs1Q8JZK9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hmgcs1Q8JZK9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hmgcs1Q8JZK9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Hmgcs1Q8JZK9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmgcs1Q8JZK9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmgcs1Q8JZK9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmgcs1Q8JZK9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hmgcs1Q8JZK9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmgcs1Q8JZK9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmgcs1Q8JZK9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hmgcs1Q8JZK9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
Hmgcs1Q8JZK9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.67■□□□□ 0.74
Hmgcs1Q8JZK9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmgcs1Q8JZK9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmgcs1Q8JZK9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hmgcs1Q8JZK9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.67■□□□□ 0.74
Hmgcs1Q8JZK9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Hmgcs1Q8JZK9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hmgcs1Q8JZK9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.66■□□□□ 0.74
Hmgcs1Q8JZK9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.66■□□□□ 0.74
Hmgcs1Q8JZK9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmgcs1Q8JZK9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmgcs1Q8JZK9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmgcs1Q8JZK9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgcs1Q8JZK9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgcs1Q8JZK9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgcs1Q8JZK9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgcs1Q8JZK9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgcs1Q8JZK9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.65■□□□□ 0.74
Hmgcs1Q8JZK9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Hmgcs1Q8JZK9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.65■□□□□ 0.74
Hmgcs1Q8JZK9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgcs1Q8JZK9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.65■□□□□ 0.74
Hmgcs1Q8JZK9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hmgcs1Q8JZK9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Hmgcs1Q8JZK9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.64■□□□□ 0.73
Hmgcs1Q8JZK9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hmgcs1Q8JZK9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.64■□□□□ 0.73
Hmgcs1Q8JZK9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmgcs1Q8JZK9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmgcs1Q8JZK9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmgcs1Q8JZK9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmgcs1Q8JZK9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgcs1Q8JZK9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgcs1Q8JZK9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgcs1Q8JZK9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgcs1Q8JZK9 Gm45444-201ENSMUST00000211394 898 ntBASIC19.63■□□□□ 0.73
Hmgcs1Q8JZK9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgcs1Q8JZK9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgcs1Q8JZK9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgcs1Q8JZK9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgcs1Q8JZK9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Hmgcs1Q8JZK9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgcs1Q8JZK9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgcs1Q8JZK9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Hmgcs1Q8JZK9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgcs1Q8JZK9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgcs1Q8JZK9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgcs1Q8JZK9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgcs1Q8JZK9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.62■□□□□ 0.73
Hmgcs1Q8JZK9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Hmgcs1Q8JZK9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgcs1Q8JZK9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgcs1Q8JZK9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Hmgcs1Q8JZK9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgcs1Q8JZK9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hmgcs1Q8JZK9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmgcs1Q8JZK9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Hmgcs1Q8JZK9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hmgcs1Q8JZK9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms