Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SynpoQ8CC35 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SynpoQ8CC35 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SynpoQ8CC35 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.87■□□□□ 0.77
SynpoQ8CC35 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SynpoQ8CC35 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SynpoQ8CC35 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SynpoQ8CC35 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SynpoQ8CC35 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SynpoQ8CC35 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SynpoQ8CC35 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SynpoQ8CC35 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.86■□□□□ 0.77
SynpoQ8CC35 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SynpoQ8CC35 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SynpoQ8CC35 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.86■□□□□ 0.77
SynpoQ8CC35 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SynpoQ8CC35 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.86■□□□□ 0.77
SynpoQ8CC35 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
SynpoQ8CC35 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SynpoQ8CC35 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SynpoQ8CC35 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SynpoQ8CC35 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SynpoQ8CC35 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SynpoQ8CC35 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SynpoQ8CC35 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SynpoQ8CC35 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SynpoQ8CC35 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.84■□□□□ 0.77
SynpoQ8CC35 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SynpoQ8CC35 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.84■□□□□ 0.77
SynpoQ8CC35 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SynpoQ8CC35 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.84■□□□□ 0.77
SynpoQ8CC35 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SynpoQ8CC35 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SynpoQ8CC35 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SynpoQ8CC35 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.83■□□□□ 0.77
SynpoQ8CC35 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.83■□□□□ 0.77
SynpoQ8CC35 Gm10399-202ENSMUST00000202768 748 ntBASIC19.83■□□□□ 0.77
SynpoQ8CC35 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.83■□□□□ 0.77
SynpoQ8CC35 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SynpoQ8CC35 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SynpoQ8CC35 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SynpoQ8CC35 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SynpoQ8CC35 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SynpoQ8CC35 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.82■□□□□ 0.76
SynpoQ8CC35 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SynpoQ8CC35 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.82■□□□□ 0.76
SynpoQ8CC35 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SynpoQ8CC35 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SynpoQ8CC35 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SynpoQ8CC35 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SynpoQ8CC35 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.82■□□□□ 0.76
SynpoQ8CC35 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SynpoQ8CC35 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SynpoQ8CC35 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SynpoQ8CC35 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SynpoQ8CC35 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SynpoQ8CC35 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SynpoQ8CC35 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SynpoQ8CC35 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.82■□□□□ 0.76
SynpoQ8CC35 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SynpoQ8CC35 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.82■□□□□ 0.76
SynpoQ8CC35 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
SynpoQ8CC35 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SynpoQ8CC35 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SynpoQ8CC35 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SynpoQ8CC35 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SynpoQ8CC35 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SynpoQ8CC35 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SynpoQ8CC35 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SynpoQ8CC35 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SynpoQ8CC35 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SynpoQ8CC35 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SynpoQ8CC35 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SynpoQ8CC35 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SynpoQ8CC35 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SynpoQ8CC35 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SynpoQ8CC35 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SynpoQ8CC35 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
SynpoQ8CC35 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.78■□□□□ 0.76
SynpoQ8CC35 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SynpoQ8CC35 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.78■□□□□ 0.76
SynpoQ8CC35 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SynpoQ8CC35 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SynpoQ8CC35 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.78■□□□□ 0.76
SynpoQ8CC35 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SynpoQ8CC35 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SynpoQ8CC35 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SynpoQ8CC35 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SynpoQ8CC35 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SynpoQ8CC35 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SynpoQ8CC35 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SynpoQ8CC35 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
SynpoQ8CC35 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SynpoQ8CC35 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SynpoQ8CC35 Gm22238-201ENSMUST00000175222 88 ntBASIC19.77■□□□□ 0.76
SynpoQ8CC35 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.77■□□□□ 0.76
SynpoQ8CC35 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.77■□□□□ 0.76
SynpoQ8CC35 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SynpoQ8CC35 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SynpoQ8CC35 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms