Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.64■□□□□ 0.42
Ttc28Q80XJ3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ttc28Q80XJ3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ttc28Q80XJ3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Ttc28Q80XJ3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ttc28Q80XJ3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ttc28Q80XJ3 Gm10033-202ENSMUST00000211874 928 ntBASIC17.64■□□□□ 0.41
Ttc28Q80XJ3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ttc28Q80XJ3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ttc28Q80XJ3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ttc28Q80XJ3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ttc28Q80XJ3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ttc28Q80XJ3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ttc28Q80XJ3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ttc28Q80XJ3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ttc28Q80XJ3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
Ttc28Q80XJ3 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.63■□□□□ 0.41
Ttc28Q80XJ3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ttc28Q80XJ3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ttc28Q80XJ3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ttc28Q80XJ3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.62■□□□□ 0.41
Ttc28Q80XJ3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.62■□□□□ 0.41
Ttc28Q80XJ3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ttc28Q80XJ3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.61■□□□□ 0.41
Ttc28Q80XJ3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.61■□□□□ 0.41
Ttc28Q80XJ3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ttc28Q80XJ3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ttc28Q80XJ3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.61■□□□□ 0.41
Ttc28Q80XJ3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ttc28Q80XJ3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.61■□□□□ 0.41
Ttc28Q80XJ3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ttc28Q80XJ3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ttc28Q80XJ3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Ttc28Q80XJ3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.61■□□□□ 0.41
Ttc28Q80XJ3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ttc28Q80XJ3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ttc28Q80XJ3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ttc28Q80XJ3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Ttc28Q80XJ3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ttc28Q80XJ3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ttc28Q80XJ3 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.59■□□□□ 0.41
Ttc28Q80XJ3 Gm43530-201ENSMUST00000195920 274 ntBASIC17.59■□□□□ 0.41
Ttc28Q80XJ3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ttc28Q80XJ3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ttc28Q80XJ3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ttc28Q80XJ3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ttc28Q80XJ3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ttc28Q80XJ3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.59■□□□□ 0.41
Ttc28Q80XJ3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ttc28Q80XJ3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ttc28Q80XJ3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ttc28Q80XJ3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ttc28Q80XJ3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.58■□□□□ 0.41
Ttc28Q80XJ3 Smad6-203ENSMUST00000179458 273 ntBASIC17.58■□□□□ 0.41
Ttc28Q80XJ3 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
Ttc28Q80XJ3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ttc28Q80XJ3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ttc28Q80XJ3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.58■□□□□ 0.4
Ttc28Q80XJ3 Gm40848-201ENSMUST00000221998 324 ntBASIC17.58■□□□□ 0.4
Ttc28Q80XJ3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ttc28Q80XJ3 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ttc28Q80XJ3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ttc28Q80XJ3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ttc28Q80XJ3 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ttc28Q80XJ3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.57■□□□□ 0.4
Ttc28Q80XJ3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ttc28Q80XJ3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ttc28Q80XJ3 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.56■□□□□ 0.4
Ttc28Q80XJ3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ttc28Q80XJ3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ttc28Q80XJ3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ttc28Q80XJ3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ttc28Q80XJ3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ttc28Q80XJ3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ttc28Q80XJ3 AV356131-201ENSMUST00000206201 750 ntBASIC17.55■□□□□ 0.4
Ttc28Q80XJ3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.55■□□□□ 0.4
Ttc28Q80XJ3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.55■□□□□ 0.4
Ttc28Q80XJ3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ttc28Q80XJ3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.55■□□□□ 0.4
Ttc28Q80XJ3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ttc28Q80XJ3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Ttc28Q80XJ3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ttc28Q80XJ3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ttc28Q80XJ3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ttc28Q80XJ3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ttc28Q80XJ3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ttc28Q80XJ3 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ttc28Q80XJ3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ttc28Q80XJ3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ttc28Q80XJ3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ttc28Q80XJ3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ttc28Q80XJ3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ttc28Q80XJ3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Ttc28Q80XJ3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ttc28Q80XJ3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ttc28Q80XJ3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ttc28Q80XJ3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ttc28Q80XJ3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ttc28Q80XJ3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ttc28Q80XJ3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms