Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops9Q3U898 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops9Q3U898 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops9Q3U898 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Cops9Q3U898 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops9Q3U898 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cops9Q3U898 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops9Q3U898 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC14.23□□□□□ -0.13
Cops9Q3U898 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops9Q3U898 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.23□□□□□ -0.13
Cops9Q3U898 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops9Q3U898 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cops9Q3U898 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops9Q3U898 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops9Q3U898 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cops9Q3U898 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops9Q3U898 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
Cops9Q3U898 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cops9Q3U898 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops9Q3U898 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC14.22□□□□□ -0.13
Cops9Q3U898 Gm9397-201ENSMUST00000200125 605 ntBASIC14.22□□□□□ -0.13
Cops9Q3U898 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops9Q3U898 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops9Q3U898 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops9Q3U898 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops9Q3U898 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cops9Q3U898 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cops9Q3U898 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops9Q3U898 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops9Q3U898 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cops9Q3U898 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cops9Q3U898 Gm43403-201ENSMUST00000198011 1786 ntBASIC14.22□□□□□ -0.13
Cops9Q3U898 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops9Q3U898 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops9Q3U898 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cops9Q3U898 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC14.21□□□□□ -0.13
Cops9Q3U898 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cops9Q3U898 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops9Q3U898 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops9Q3U898 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops9Q3U898 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops9Q3U898 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC14.21□□□□□ -0.13
Cops9Q3U898 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Cops9Q3U898 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops9Q3U898 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops9Q3U898 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops9Q3U898 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cops9Q3U898 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops9Q3U898 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops9Q3U898 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cops9Q3U898 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops9Q3U898 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC14.2□□□□□ -0.14
Cops9Q3U898 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops9Q3U898 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC14.2□□□□□ -0.14
Cops9Q3U898 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops9Q3U898 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops9Q3U898 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops9Q3U898 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cops9Q3U898 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC14.2□□□□□ -0.14
Cops9Q3U898 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cops9Q3U898 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cops9Q3U898 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cops9Q3U898 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cops9Q3U898 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cops9Q3U898 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cops9Q3U898 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cops9Q3U898 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cops9Q3U898 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cops9Q3U898 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops9Q3U898 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops9Q3U898 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cops9Q3U898 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cops9Q3U898 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cops9Q3U898 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops9Q3U898 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC14.18□□□□□ -0.14
Cops9Q3U898 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops9Q3U898 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops9Q3U898 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops9Q3U898 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops9Q3U898 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops9Q3U898 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops9Q3U898 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops9Q3U898 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops9Q3U898 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops9Q3U898 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cops9Q3U898 Kdm3b-204ENSMUST00000224715 2032 ntBASIC14.17□□□□□ -0.14
Cops9Q3U898 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops9Q3U898 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cops9Q3U898 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops9Q3U898 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cops9Q3U898 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cops9Q3U898 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops9Q3U898 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops9Q3U898 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
Cops9Q3U898 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops9Q3U898 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC14.16□□□□□ -0.14
Cops9Q3U898 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops9Q3U898 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops9Q3U898 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cops9Q3U898 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms