Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pkd1l3Q2EG98 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pkd1l3Q2EG98 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pkd1l3Q2EG98 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pkd1l3Q2EG98 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pkd1l3Q2EG98 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pkd1l3Q2EG98 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.58■□□□□ 0.56
Pkd1l3Q2EG98 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.58■□□□□ 0.56
Pkd1l3Q2EG98 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pkd1l3Q2EG98 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pkd1l3Q2EG98 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pkd1l3Q2EG98 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pkd1l3Q2EG98 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pkd1l3Q2EG98 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pkd1l3Q2EG98 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Pkd1l3Q2EG98 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pkd1l3Q2EG98 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Pkd1l3Q2EG98 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pkd1l3Q2EG98 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pkd1l3Q2EG98 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pkd1l3Q2EG98 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pkd1l3Q2EG98 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pkd1l3Q2EG98 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.56■□□□□ 0.56
Pkd1l3Q2EG98 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Pkd1l3Q2EG98 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pkd1l3Q2EG98 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Pkd1l3Q2EG98 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pkd1l3Q2EG98 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pkd1l3Q2EG98 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pkd1l3Q2EG98 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.56■□□□□ 0.56
Pkd1l3Q2EG98 Gm43137-201ENSMUST00000198052 594 ntBASIC18.55■□□□□ 0.56
Pkd1l3Q2EG98 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pkd1l3Q2EG98 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pkd1l3Q2EG98 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pkd1l3Q2EG98 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Pkd1l3Q2EG98 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.54■□□□□ 0.56
Pkd1l3Q2EG98 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.54■□□□□ 0.56
Pkd1l3Q2EG98 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pkd1l3Q2EG98 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Pkd1l3Q2EG98 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Pkd1l3Q2EG98 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.54■□□□□ 0.56
Pkd1l3Q2EG98 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pkd1l3Q2EG98 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
Pkd1l3Q2EG98 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pkd1l3Q2EG98 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pkd1l3Q2EG98 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pkd1l3Q2EG98 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Pkd1l3Q2EG98 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.53■□□□□ 0.56
Pkd1l3Q2EG98 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.53■□□□□ 0.56
Pkd1l3Q2EG98 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.53■□□□□ 0.56
Pkd1l3Q2EG98 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pkd1l3Q2EG98 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Pkd1l3Q2EG98 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pkd1l3Q2EG98 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pkd1l3Q2EG98 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pkd1l3Q2EG98 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pkd1l3Q2EG98 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Pkd1l3Q2EG98 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Pkd1l3Q2EG98 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pkd1l3Q2EG98 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
Pkd1l3Q2EG98 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Pkd1l3Q2EG98 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Pkd1l3Q2EG98 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Pkd1l3Q2EG98 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pkd1l3Q2EG98 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pkd1l3Q2EG98 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Pkd1l3Q2EG98 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pkd1l3Q2EG98 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pkd1l3Q2EG98 Gm9870-201ENSMUST00000063874 645 ntBASIC18.51■□□□□ 0.55
Pkd1l3Q2EG98 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pkd1l3Q2EG98 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pkd1l3Q2EG98 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pkd1l3Q2EG98 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pkd1l3Q2EG98 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pkd1l3Q2EG98 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pkd1l3Q2EG98 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pkd1l3Q2EG98 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pkd1l3Q2EG98 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.5■□□□□ 0.55
Pkd1l3Q2EG98 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.5■□□□□ 0.55
Pkd1l3Q2EG98 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Pkd1l3Q2EG98 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pkd1l3Q2EG98 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.49■□□□□ 0.55
Pkd1l3Q2EG98 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pkd1l3Q2EG98 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pkd1l3Q2EG98 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pkd1l3Q2EG98 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pkd1l3Q2EG98 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.49■□□□□ 0.55
Pkd1l3Q2EG98 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pkd1l3Q2EG98 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Pkd1l3Q2EG98 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.49■□□□□ 0.55
Pkd1l3Q2EG98 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Pkd1l3Q2EG98 Gm7143-201ENSMUST00000222811 859 ntBASIC18.49■□□□□ 0.55
Pkd1l3Q2EG98 Gm6139-201ENSMUST00000079261 882 ntBASIC18.49■□□□□ 0.55
Pkd1l3Q2EG98 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pkd1l3Q2EG98 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pkd1l3Q2EG98 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pkd1l3Q2EG98 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pkd1l3Q2EG98 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pkd1l3Q2EG98 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.47■□□□□ 0.55
Pkd1l3Q2EG98 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms