Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Atp6v1aP50516 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Atp6v1aP50516 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
Atp6v1aP50516 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Atp6v1aP50516 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Atp6v1aP50516 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Atp6v1aP50516 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Atp6v1aP50516 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC25.01■■□□□ 1.59
Atp6v1aP50516 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
Atp6v1aP50516 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Atp6v1aP50516 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
Atp6v1aP50516 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
Atp6v1aP50516 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC25■■□□□ 1.59
Atp6v1aP50516 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC25■■□□□ 1.59
Atp6v1aP50516 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC25■■□□□ 1.59
Atp6v1aP50516 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Atp6v1aP50516 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Atp6v1aP50516 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC25■■□□□ 1.59
Atp6v1aP50516 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Atp6v1aP50516 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Atp6v1aP50516 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Atp6v1aP50516 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC24.99■■□□□ 1.59
Atp6v1aP50516 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC24.99■■□□□ 1.59
Atp6v1aP50516 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Atp6v1aP50516 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Atp6v1aP50516 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Atp6v1aP50516 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
Atp6v1aP50516 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Atp6v1aP50516 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Atp6v1aP50516 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Atp6v1aP50516 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Atp6v1aP50516 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
Atp6v1aP50516 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Atp6v1aP50516 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Atp6v1aP50516 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC24.96■■□□□ 1.59
Atp6v1aP50516 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Atp6v1aP50516 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Atp6v1aP50516 Cdc34b-202ENSMUST00000188741 1252 ntBASIC24.96■■□□□ 1.59
Atp6v1aP50516 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Atp6v1aP50516 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Atp6v1aP50516 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC24.96■■□□□ 1.59
Atp6v1aP50516 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Atp6v1aP50516 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Atp6v1aP50516 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Atp6v1aP50516 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
Atp6v1aP50516 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Atp6v1aP50516 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
Atp6v1aP50516 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Atp6v1aP50516 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
Atp6v1aP50516 Gm6085-201ENSMUST00000182774 1470 ntBASIC24.95■■□□□ 1.58
Atp6v1aP50516 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Atp6v1aP50516 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Atp6v1aP50516 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Atp6v1aP50516 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Atp6v1aP50516 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Atp6v1aP50516 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
Atp6v1aP50516 Gm7160-202ENSMUST00000188519 1027 ntBASIC24.94■■□□□ 1.58
Atp6v1aP50516 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC24.94■■□□□ 1.58
Atp6v1aP50516 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC24.94■■□□□ 1.58
Atp6v1aP50516 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Atp6v1aP50516 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
Atp6v1aP50516 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
Atp6v1aP50516 Gm20634-201ENSMUST00000090779 2956 ntBASIC24.93■■□□□ 1.58
Atp6v1aP50516 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
Atp6v1aP50516 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Atp6v1aP50516 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Atp6v1aP50516 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Atp6v1aP50516 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
Atp6v1aP50516 Gm26833-201ENSMUST00000180899 440 ntBASIC24.92■■□□□ 1.58
Atp6v1aP50516 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC24.92■■□□□ 1.58
Atp6v1aP50516 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Atp6v1aP50516 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Atp6v1aP50516 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Atp6v1aP50516 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC24.91■■□□□ 1.58
Atp6v1aP50516 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC24.91■■□□□ 1.58
Atp6v1aP50516 Gm7291-201ENSMUST00000199147 382 ntBASIC24.91■■□□□ 1.58
Atp6v1aP50516 AC166356.1-201ENSMUST00000228236 1426 ntBASIC24.91■■□□□ 1.58
Atp6v1aP50516 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
Atp6v1aP50516 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC24.91■■□□□ 1.58
Atp6v1aP50516 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Atp6v1aP50516 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Atp6v1aP50516 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Atp6v1aP50516 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Atp6v1aP50516 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Atp6v1aP50516 Spcs1-204ENSMUST00000226782 949 ntBASIC24.9■■□□□ 1.58
Atp6v1aP50516 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
Atp6v1aP50516 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Atp6v1aP50516 H3f3aos-201ENSMUST00000097448 2905 ntBASIC24.89■■□□□ 1.58
Atp6v1aP50516 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Atp6v1aP50516 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Atp6v1aP50516 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC24.89■■□□□ 1.57
Atp6v1aP50516 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Atp6v1aP50516 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Atp6v1aP50516 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Atp6v1aP50516 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Atp6v1aP50516 Gm43530-201ENSMUST00000195920 274 ntBASIC24.88■■□□□ 1.57
Atp6v1aP50516 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Atp6v1aP50516 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC24.88■■□□□ 1.57
Atp6v1aP50516 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Atp6v1aP50516 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC24.88■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms