Protein–RNA interactions for Protein: P0DOY1

Dnmt3c, DNA (cytosine-5)-methyltransferase 3C, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3cP0DOY1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dnmt3cP0DOY1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dnmt3cP0DOY1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Dnmt3cP0DOY1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dnmt3cP0DOY1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Dnmt3cP0DOY1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dnmt3cP0DOY1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dnmt3cP0DOY1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dnmt3cP0DOY1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Dnmt3cP0DOY1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Dnmt3cP0DOY1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Dnmt3cP0DOY1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.67■□□□□ 0.9
Dnmt3cP0DOY1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dnmt3cP0DOY1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dnmt3cP0DOY1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dnmt3cP0DOY1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dnmt3cP0DOY1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dnmt3cP0DOY1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dnmt3cP0DOY1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Dnmt3cP0DOY1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dnmt3cP0DOY1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Dnmt3cP0DOY1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.66■□□□□ 0.9
Dnmt3cP0DOY1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.66■□□□□ 0.9
Dnmt3cP0DOY1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.66■□□□□ 0.9
Dnmt3cP0DOY1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.66■□□□□ 0.9
Dnmt3cP0DOY1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.66■□□□□ 0.9
Dnmt3cP0DOY1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dnmt3cP0DOY1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dnmt3cP0DOY1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dnmt3cP0DOY1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Dnmt3cP0DOY1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dnmt3cP0DOY1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dnmt3cP0DOY1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dnmt3cP0DOY1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dnmt3cP0DOY1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dnmt3cP0DOY1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dnmt3cP0DOY1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dnmt3cP0DOY1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dnmt3cP0DOY1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dnmt3cP0DOY1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
Dnmt3cP0DOY1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Dnmt3cP0DOY1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Dnmt3cP0DOY1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Dnmt3cP0DOY1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Dnmt3cP0DOY1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Dnmt3cP0DOY1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Dnmt3cP0DOY1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Dnmt3cP0DOY1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Dnmt3cP0DOY1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.63■□□□□ 0.89
Dnmt3cP0DOY1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.63■□□□□ 0.89
Dnmt3cP0DOY1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Dnmt3cP0DOY1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Dnmt3cP0DOY1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Dnmt3cP0DOY1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Dnmt3cP0DOY1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Dnmt3cP0DOY1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Dnmt3cP0DOY1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Dnmt3cP0DOY1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Dnmt3cP0DOY1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Dnmt3cP0DOY1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Dnmt3cP0DOY1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Dnmt3cP0DOY1 Gm10399-202ENSMUST00000202768 748 ntBASIC20.62■□□□□ 0.89
Dnmt3cP0DOY1 Gm45102-201ENSMUST00000207427 857 ntBASIC20.62■□□□□ 0.89
Dnmt3cP0DOY1 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.62■□□□□ 0.89
Dnmt3cP0DOY1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Dnmt3cP0DOY1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Dnmt3cP0DOY1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
Dnmt3cP0DOY1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Dnmt3cP0DOY1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Dnmt3cP0DOY1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.62■□□□□ 0.89
Dnmt3cP0DOY1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.61■□□□□ 0.89
Dnmt3cP0DOY1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.61■□□□□ 0.89
Dnmt3cP0DOY1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Dnmt3cP0DOY1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Dnmt3cP0DOY1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Dnmt3cP0DOY1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Dnmt3cP0DOY1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Dnmt3cP0DOY1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Dnmt3cP0DOY1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Dnmt3cP0DOY1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Dnmt3cP0DOY1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Dnmt3cP0DOY1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Dnmt3cP0DOY1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Dnmt3cP0DOY1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Dnmt3cP0DOY1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Dnmt3cP0DOY1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.59■□□□□ 0.89
Dnmt3cP0DOY1 Gm9959-201ENSMUST00000068277 390 ntBASIC20.59■□□□□ 0.89
Dnmt3cP0DOY1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Dnmt3cP0DOY1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Dnmt3cP0DOY1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Dnmt3cP0DOY1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Dnmt3cP0DOY1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Dnmt3cP0DOY1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Dnmt3cP0DOY1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Dnmt3cP0DOY1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.58■□□□□ 0.89
Dnmt3cP0DOY1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.58■□□□□ 0.89
Dnmt3cP0DOY1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Dnmt3cP0DOY1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Dnmt3cP0DOY1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.58■□□□□ 0.89
Dnmt3cP0DOY1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms