Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Alx4O35137 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Alx4O35137 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.45■□□□□ 0.54
Alx4O35137 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Alx4O35137 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Alx4O35137 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Alx4O35137 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Alx4O35137 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Alx4O35137 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
Alx4O35137 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.44■□□□□ 0.54
Alx4O35137 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Alx4O35137 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Alx4O35137 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Alx4O35137 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Alx4O35137 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Alx4O35137 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Alx4O35137 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Alx4O35137 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Alx4O35137 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Alx4O35137 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Alx4O35137 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Alx4O35137 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Alx4O35137 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Alx4O35137 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Alx4O35137 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Alx4O35137 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Alx4O35137 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Alx4O35137 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.42■□□□□ 0.54
Alx4O35137 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Alx4O35137 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Alx4O35137 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Alx4O35137 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Alx4O35137 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Alx4O35137 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.41■□□□□ 0.54
Alx4O35137 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Alx4O35137 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Alx4O35137 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.41■□□□□ 0.54
Alx4O35137 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Alx4O35137 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Alx4O35137 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Alx4O35137 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Alx4O35137 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Alx4O35137 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.41■□□□□ 0.54
Alx4O35137 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Alx4O35137 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Alx4O35137 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.4■□□□□ 0.54
Alx4O35137 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.4■□□□□ 0.54
Alx4O35137 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Alx4O35137 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Alx4O35137 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.4■□□□□ 0.54
Alx4O35137 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Alx4O35137 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Alx4O35137 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Alx4O35137 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Alx4O35137 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Alx4O35137 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Alx4O35137 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Alx4O35137 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Alx4O35137 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Alx4O35137 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Alx4O35137 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Alx4O35137 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Alx4O35137 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Alx4O35137 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Alx4O35137 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Alx4O35137 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Alx4O35137 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alx4O35137 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.38■□□□□ 0.53
Alx4O35137 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alx4O35137 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.38■□□□□ 0.53
Alx4O35137 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alx4O35137 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Alx4O35137 Gm14523-201ENSMUST00000117260 558 ntBASIC18.38■□□□□ 0.53
Alx4O35137 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.38■□□□□ 0.53
Alx4O35137 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Alx4O35137 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alx4O35137 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alx4O35137 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Alx4O35137 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Alx4O35137 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alx4O35137 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.37■□□□□ 0.53
Alx4O35137 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alx4O35137 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alx4O35137 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alx4O35137 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alx4O35137 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alx4O35137 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.37■□□□□ 0.53
Alx4O35137 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alx4O35137 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alx4O35137 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alx4O35137 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Alx4O35137 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Alx4O35137 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
Alx4O35137 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Alx4O35137 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Alx4O35137 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Alx4O35137 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Alx4O35137 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Alx4O35137 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.36■□□□□ 0.53
Alx4O35137 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms