Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Ebf3O08791 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.41■■□□□ 1.02
Ebf3O08791 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ebf3O08791 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ebf3O08791 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ebf3O08791 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Ebf3O08791 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Ebf3O08791 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ebf3O08791 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ebf3O08791 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.41■■□□□ 1.02
Ebf3O08791 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ebf3O08791 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ebf3O08791 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ebf3O08791 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ebf3O08791 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ebf3O08791 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.4■■□□□ 1.02
Ebf3O08791 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ebf3O08791 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ebf3O08791 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ebf3O08791 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ebf3O08791 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ebf3O08791 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.39■■□□□ 1.02
Ebf3O08791 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ebf3O08791 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.39■■□□□ 1.01
Ebf3O08791 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.39■■□□□ 1.01
Ebf3O08791 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.39■■□□□ 1.01
Ebf3O08791 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ebf3O08791 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ebf3O08791 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.38■■□□□ 1.01
Ebf3O08791 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ebf3O08791 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ebf3O08791 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ebf3O08791 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ebf3O08791 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ebf3O08791 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ebf3O08791 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ebf3O08791 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ebf3O08791 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ebf3O08791 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ebf3O08791 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ebf3O08791 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ebf3O08791 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ebf3O08791 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Ebf3O08791 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Ebf3O08791 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.36■■□□□ 1.01
Ebf3O08791 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Ebf3O08791 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.36■■□□□ 1.01
Ebf3O08791 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Ebf3O08791 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
Ebf3O08791 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ebf3O08791 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ebf3O08791 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.36■■□□□ 1.01
Ebf3O08791 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ebf3O08791 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ebf3O08791 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Ebf3O08791 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ebf3O08791 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Ebf3O08791 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ebf3O08791 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Ebf3O08791 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ebf3O08791 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.35■■□□□ 1.01
Ebf3O08791 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.35■■□□□ 1.01
Ebf3O08791 Gm9870-201ENSMUST00000063874 645 ntBASIC21.35■■□□□ 1.01
Ebf3O08791 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ebf3O08791 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.35■■□□□ 1.01
Ebf3O08791 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ebf3O08791 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ebf3O08791 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ebf3O08791 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Ebf3O08791 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ebf3O08791 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ebf3O08791 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ebf3O08791 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Ebf3O08791 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ebf3O08791 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Ebf3O08791 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Ebf3O08791 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ebf3O08791 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Ebf3O08791 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.33■■□□□ 1.01
Ebf3O08791 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ebf3O08791 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Ebf3O08791 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ebf3O08791 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.33■■□□□ 1.01
Ebf3O08791 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ebf3O08791 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ebf3O08791 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ebf3O08791 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.32■■□□□ 1
Ebf3O08791 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.32■■□□□ 1
Ebf3O08791 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ebf3O08791 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ebf3O08791 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.32■■□□□ 1
Ebf3O08791 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ebf3O08791 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Ebf3O08791 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
Ebf3O08791 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ebf3O08791 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.31■■□□□ 1
Ebf3O08791 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ebf3O08791 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ebf3O08791 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ebf3O08791 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms