Protein–RNA interactions for Protein: D3YUJ3

Ccnyl1, Cyclin Y-like 1, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnyl1D3YUJ3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Ccnyl1D3YUJ3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccnyl1D3YUJ3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccnyl1D3YUJ3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccnyl1D3YUJ3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Ccnyl1D3YUJ3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccnyl1D3YUJ3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ccnyl1D3YUJ3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ccnyl1D3YUJ3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ccnyl1D3YUJ3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccnyl1D3YUJ3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ccnyl1D3YUJ3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ccnyl1D3YUJ3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Ccnyl1D3YUJ3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccnyl1D3YUJ3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccnyl1D3YUJ3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccnyl1D3YUJ3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccnyl1D3YUJ3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ccnyl1D3YUJ3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Ccnyl1D3YUJ3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccnyl1D3YUJ3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccnyl1D3YUJ3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.38■■□□□ 1.01
Ccnyl1D3YUJ3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ccnyl1D3YUJ3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccnyl1D3YUJ3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccnyl1D3YUJ3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccnyl1D3YUJ3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Ccnyl1D3YUJ3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Ccnyl1D3YUJ3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Ccnyl1D3YUJ3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccnyl1D3YUJ3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ccnyl1D3YUJ3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccnyl1D3YUJ3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccnyl1D3YUJ3 Gm10232-201ENSMUST00000089221 720 ntBASIC21.37■■□□□ 1.01
Ccnyl1D3YUJ3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccnyl1D3YUJ3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccnyl1D3YUJ3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.36■■□□□ 1.01
Ccnyl1D3YUJ3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.36■■□□□ 1.01
Ccnyl1D3YUJ3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccnyl1D3YUJ3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccnyl1D3YUJ3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccnyl1D3YUJ3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccnyl1D3YUJ3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccnyl1D3YUJ3 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.36■■□□□ 1.01
Ccnyl1D3YUJ3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccnyl1D3YUJ3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccnyl1D3YUJ3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccnyl1D3YUJ3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.35■■□□□ 1.01
Ccnyl1D3YUJ3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccnyl1D3YUJ3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccnyl1D3YUJ3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccnyl1D3YUJ3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccnyl1D3YUJ3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccnyl1D3YUJ3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccnyl1D3YUJ3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccnyl1D3YUJ3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.34■■□□□ 1.01
Ccnyl1D3YUJ3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccnyl1D3YUJ3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccnyl1D3YUJ3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccnyl1D3YUJ3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ccnyl1D3YUJ3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccnyl1D3YUJ3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccnyl1D3YUJ3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccnyl1D3YUJ3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Ccnyl1D3YUJ3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Ccnyl1D3YUJ3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ccnyl1D3YUJ3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccnyl1D3YUJ3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Ccnyl1D3YUJ3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.33■■□□□ 1.01
Ccnyl1D3YUJ3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.33■■□□□ 1.01
Ccnyl1D3YUJ3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccnyl1D3YUJ3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccnyl1D3YUJ3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.33■■□□□ 1
Ccnyl1D3YUJ3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Ccnyl1D3YUJ3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccnyl1D3YUJ3 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.32■■□□□ 1
Ccnyl1D3YUJ3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccnyl1D3YUJ3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Ccnyl1D3YUJ3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.32■■□□□ 1
Ccnyl1D3YUJ3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccnyl1D3YUJ3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccnyl1D3YUJ3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccnyl1D3YUJ3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.32■■□□□ 1
Ccnyl1D3YUJ3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
Ccnyl1D3YUJ3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccnyl1D3YUJ3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccnyl1D3YUJ3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ccnyl1D3YUJ3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ccnyl1D3YUJ3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.31■■□□□ 1
Ccnyl1D3YUJ3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccnyl1D3YUJ3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ccnyl1D3YUJ3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ccnyl1D3YUJ3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ccnyl1D3YUJ3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccnyl1D3YUJ3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.3■■□□□ 1
Ccnyl1D3YUJ3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
Ccnyl1D3YUJ3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccnyl1D3YUJ3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.3■■□□□ 1
Ccnyl1D3YUJ3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccnyl1D3YUJ3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms