Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav12d-1A0N8R0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trav12d-1A0N8R0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav12d-1A0N8R0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav12d-1A0N8R0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav12d-1A0N8R0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav12d-1A0N8R0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav12d-1A0N8R0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav12d-1A0N8R0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav12d-1A0N8R0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav12d-1A0N8R0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav12d-1A0N8R0 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.63■□□□□ 0.25
Trav12d-1A0N8R0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trav12d-1A0N8R0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav12d-1A0N8R0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav12d-1A0N8R0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trav12d-1A0N8R0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav12d-1A0N8R0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav12d-1A0N8R0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav12d-1A0N8R0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav12d-1A0N8R0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav12d-1A0N8R0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.62■□□□□ 0.25
Trav12d-1A0N8R0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav12d-1A0N8R0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav12d-1A0N8R0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav12d-1A0N8R0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.61■□□□□ 0.25
Trav12d-1A0N8R0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.61■□□□□ 0.25
Trav12d-1A0N8R0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav12d-1A0N8R0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Trav12d-1A0N8R0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav12d-1A0N8R0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav12d-1A0N8R0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav12d-1A0N8R0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav12d-1A0N8R0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav12d-1A0N8R0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav12d-1A0N8R0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav12d-1A0N8R0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav12d-1A0N8R0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trav12d-1A0N8R0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav12d-1A0N8R0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav12d-1A0N8R0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav12d-1A0N8R0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav12d-1A0N8R0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav12d-1A0N8R0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trav12d-1A0N8R0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav12d-1A0N8R0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trav12d-1A0N8R0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav12d-1A0N8R0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trav12d-1A0N8R0 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.59■□□□□ 0.25
Trav12d-1A0N8R0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav12d-1A0N8R0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav12d-1A0N8R0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav12d-1A0N8R0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.59■□□□□ 0.25
Trav12d-1A0N8R0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav12d-1A0N8R0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav12d-1A0N8R0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav12d-1A0N8R0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav12d-1A0N8R0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav12d-1A0N8R0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav12d-1A0N8R0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Trav12d-1A0N8R0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav12d-1A0N8R0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav12d-1A0N8R0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav12d-1A0N8R0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.57■□□□□ 0.24
Trav12d-1A0N8R0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav12d-1A0N8R0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav12d-1A0N8R0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.57■□□□□ 0.24
Trav12d-1A0N8R0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav12d-1A0N8R0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav12d-1A0N8R0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav12d-1A0N8R0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav12d-1A0N8R0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav12d-1A0N8R0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav12d-1A0N8R0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav12d-1A0N8R0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav12d-1A0N8R0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav12d-1A0N8R0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Trav12d-1A0N8R0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav12d-1A0N8R0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav12d-1A0N8R0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trav12d-1A0N8R0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav12d-1A0N8R0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav12d-1A0N8R0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav12d-1A0N8R0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav12d-1A0N8R0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav12d-1A0N8R0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav12d-1A0N8R0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.55■□□□□ 0.24
Trav12d-1A0N8R0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav12d-1A0N8R0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav12d-1A0N8R0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav12d-1A0N8R0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav12d-1A0N8R0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav12d-1A0N8R0 Gm14523-201ENSMUST00000117260 558 ntBASIC16.55■□□□□ 0.24
Trav12d-1A0N8R0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav12d-1A0N8R0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav12d-1A0N8R0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav12d-1A0N8R0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav12d-1A0N8R0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav12d-1A0N8R0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav12d-1A0N8R0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms