Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.58■□□□□ 0.24
Trbv19A0A0B4J1H4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trbv19A0A0B4J1H4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trbv19A0A0B4J1H4 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.57■□□□□ 0.24
Trbv19A0A0B4J1H4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv19A0A0B4J1H4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv19A0A0B4J1H4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.57■□□□□ 0.24
Trbv19A0A0B4J1H4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv19A0A0B4J1H4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv19A0A0B4J1H4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv19A0A0B4J1H4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.57■□□□□ 0.24
Trbv19A0A0B4J1H4 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv19A0A0B4J1H4 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.57■□□□□ 0.24
Trbv19A0A0B4J1H4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trbv19A0A0B4J1H4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv19A0A0B4J1H4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv19A0A0B4J1H4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv19A0A0B4J1H4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv19A0A0B4J1H4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv19A0A0B4J1H4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv19A0A0B4J1H4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv19A0A0B4J1H4 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv19A0A0B4J1H4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Trbv19A0A0B4J1H4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv19A0A0B4J1H4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.56■□□□□ 0.24
Trbv19A0A0B4J1H4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.56■□□□□ 0.24
Trbv19A0A0B4J1H4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv19A0A0B4J1H4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv19A0A0B4J1H4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv19A0A0B4J1H4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trbv19A0A0B4J1H4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv19A0A0B4J1H4 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv19A0A0B4J1H4 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv19A0A0B4J1H4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv19A0A0B4J1H4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Trbv19A0A0B4J1H4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv19A0A0B4J1H4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.55■□□□□ 0.24
Trbv19A0A0B4J1H4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Trbv19A0A0B4J1H4 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.55■□□□□ 0.24
Trbv19A0A0B4J1H4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.55■□□□□ 0.24
Trbv19A0A0B4J1H4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
Trbv19A0A0B4J1H4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trbv19A0A0B4J1H4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv19A0A0B4J1H4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv19A0A0B4J1H4 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.54■□□□□ 0.24
Trbv19A0A0B4J1H4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trbv19A0A0B4J1H4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv19A0A0B4J1H4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.54■□□□□ 0.24
Trbv19A0A0B4J1H4 Gm45444-201ENSMUST00000211394 898 ntBASIC16.54■□□□□ 0.24
Trbv19A0A0B4J1H4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trbv19A0A0B4J1H4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv19A0A0B4J1H4 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.54■□□□□ 0.24
Trbv19A0A0B4J1H4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trbv19A0A0B4J1H4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv19A0A0B4J1H4 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv19A0A0B4J1H4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv19A0A0B4J1H4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv19A0A0B4J1H4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv19A0A0B4J1H4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv19A0A0B4J1H4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv19A0A0B4J1H4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv19A0A0B4J1H4 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv19A0A0B4J1H4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Trbv19A0A0B4J1H4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.53■□□□□ 0.24
Trbv19A0A0B4J1H4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv19A0A0B4J1H4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.52■□□□□ 0.24
Trbv19A0A0B4J1H4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv19A0A0B4J1H4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv19A0A0B4J1H4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv19A0A0B4J1H4 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv19A0A0B4J1H4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv19A0A0B4J1H4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv19A0A0B4J1H4 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv19A0A0B4J1H4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv19A0A0B4J1H4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.52■□□□□ 0.24
Trbv19A0A0B4J1H4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.52■□□□□ 0.23
Trbv19A0A0B4J1H4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv19A0A0B4J1H4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.52■□□□□ 0.23
Trbv19A0A0B4J1H4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv19A0A0B4J1H4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv19A0A0B4J1H4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv19A0A0B4J1H4 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv19A0A0B4J1H4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv19A0A0B4J1H4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv19A0A0B4J1H4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv19A0A0B4J1H4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.51■□□□□ 0.23
Trbv19A0A0B4J1H4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.51■□□□□ 0.23
Trbv19A0A0B4J1H4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv19A0A0B4J1H4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv19A0A0B4J1H4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv19A0A0B4J1H4 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv19A0A0B4J1H4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv19A0A0B4J1H4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv19A0A0B4J1H4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv19A0A0B4J1H4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.5■□□□□ 0.23
Trbv19A0A0B4J1H4 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trbv19A0A0B4J1H4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv19A0A0B4J1H4 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv19A0A0B4J1H4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv19A0A0B4J1H4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms