Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Gm21092-201ENSMUST00000178995 955 ntBASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Gm7467-201ENSMUST00000185173 652 ntBASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Gm38314-201ENSMUST00000195709 625 ntBASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Gm44551-201ENSMUST00000208804 171 ntBASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
Scn8aQ9WTU3 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scn8aQ9WTU3 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12□□□□□ -0.49
Scn8aQ9WTU3 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Scn8aQ9WTU3 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scn8aQ9WTU3 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Scn8aQ9WTU3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Scn8aQ9WTU3 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Scn8aQ9WTU3 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12□□□□□ -0.49
Scn8aQ9WTU3 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Scn8aQ9WTU3 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scn8aQ9WTU3 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12□□□□□ -0.49
Scn8aQ9WTU3 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12□□□□□ -0.49
Scn8aQ9WTU3 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12□□□□□ -0.49
Scn8aQ9WTU3 Gm43186-201ENSMUST00000198130 824 ntBASIC12□□□□□ -0.49
Scn8aQ9WTU3 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Scn8aQ9WTU3 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12□□□□□ -0.49
Scn8aQ9WTU3 Gm6722-201ENSMUST00000221586 390 ntBASIC12□□□□□ -0.49
Scn8aQ9WTU3 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12□□□□□ -0.49
Scn8aQ9WTU3 AC134869.4-202ENSMUST00000224350 837 ntBASIC12□□□□□ -0.49
Scn8aQ9WTU3 AC134860.1-201ENSMUST00000224867 660 ntBASIC12□□□□□ -0.49
Scn8aQ9WTU3 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12□□□□□ -0.49
Scn8aQ9WTU3 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Scn8aQ9WTU3 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12□□□□□ -0.49
Scn8aQ9WTU3 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scn8aQ9WTU3 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scn8aQ9WTU3 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12□□□□□ -0.49
Scn8aQ9WTU3 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Scn8aQ9WTU3 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12□□□□□ -0.49
Scn8aQ9WTU3 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scn8aQ9WTU3 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12□□□□□ -0.49
Scn8aQ9WTU3 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Scn8aQ9WTU3 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12□□□□□ -0.49
Scn8aQ9WTU3 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Scn8aQ9WTU3 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Scn8aQ9WTU3 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scn8aQ9WTU3 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scn8aQ9WTU3 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Scn8aQ9WTU3 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Scn8aQ9WTU3 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Mir8093-201ENSMUST00000185043 137 ntBASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms