Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.03□□□□□ -0.16
Scn11aQ9R053 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn11aQ9R053 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC14.03□□□□□ -0.16
Scn11aQ9R053 Gm42433-201ENSMUST00000196806 940 ntBASIC14.03□□□□□ -0.16
Scn11aQ9R053 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Scn11aQ9R053 AC154257.1-202ENSMUST00000224729 843 ntBASIC14.03□□□□□ -0.16
Scn11aQ9R053 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.03□□□□□ -0.16
Scn11aQ9R053 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn11aQ9R053 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn11aQ9R053 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scn11aQ9R053 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn11aQ9R053 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.02□□□□□ -0.16
Scn11aQ9R053 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.02□□□□□ -0.16
Scn11aQ9R053 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn11aQ9R053 AC130823.1-201ENSMUST00000228929 1549 ntBASIC14.02□□□□□ -0.16
Scn11aQ9R053 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn11aQ9R053 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Scn11aQ9R053 Gm15549-201ENSMUST00000121595 622 ntBASIC14.02□□□□□ -0.16
Scn11aQ9R053 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC14.02□□□□□ -0.16
Scn11aQ9R053 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
Scn11aQ9R053 Gm9116-201ENSMUST00000192400 1018 ntBASIC14.02□□□□□ -0.16
Scn11aQ9R053 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC14.02□□□□□ -0.16
Scn11aQ9R053 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC14.02□□□□□ -0.16
Scn11aQ9R053 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn11aQ9R053 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Scn11aQ9R053 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scn11aQ9R053 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scn11aQ9R053 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn11aQ9R053 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Scn11aQ9R053 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scn11aQ9R053 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn11aQ9R053 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn11aQ9R053 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Scn11aQ9R053 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scn11aQ9R053 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.02□□□□□ -0.17
Scn11aQ9R053 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC14.02□□□□□ -0.17
Scn11aQ9R053 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scn11aQ9R053 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn11aQ9R053 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn11aQ9R053 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Scn11aQ9R053 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn11aQ9R053 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn11aQ9R053 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn11aQ9R053 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC14.01□□□□□ -0.17
Scn11aQ9R053 Gm26047-201ENSMUST00000157308 113 ntBASIC14.01□□□□□ -0.17
Scn11aQ9R053 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn11aQ9R053 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn11aQ9R053 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn11aQ9R053 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC14.01□□□□□ -0.17
Scn11aQ9R053 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC14.01□□□□□ -0.17
Scn11aQ9R053 Gm26047-202ENSMUST00000198840 115 ntBASIC14.01□□□□□ -0.17
Scn11aQ9R053 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC14.01□□□□□ -0.17
Scn11aQ9R053 CT573047.1-201ENSMUST00000223652 851 ntBASIC14.01□□□□□ -0.17
Scn11aQ9R053 AC136376.2-201ENSMUST00000228819 490 ntBASIC14.01□□□□□ -0.17
Scn11aQ9R053 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Scn11aQ9R053 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn11aQ9R053 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC14.01□□□□□ -0.17
Scn11aQ9R053 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn11aQ9R053 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn11aQ9R053 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn11aQ9R053 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn11aQ9R053 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn11aQ9R053 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn11aQ9R053 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn11aQ9R053 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn11aQ9R053 Gm38194-201ENSMUST00000194529 2211 ntBASIC14.01□□□□□ -0.17
Scn11aQ9R053 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Scn11aQ9R053 Gm37859-201ENSMUST00000195529 2173 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms