Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rtp4Q9ER80 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rtp4Q9ER80 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rtp4Q9ER80 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rtp4Q9ER80 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Gm24231-201ENSMUST00000104315 133 ntBASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Gm19208-201ENSMUST00000213861 912 ntBASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Rtp4Q9ER80 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Gm23200-201ENSMUST00000104379 132 ntBASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Gm12015-201ENSMUST00000117065 843 ntBASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Rmrp-201ENSMUST00000157463 271 ntBASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Gm25732-201ENSMUST00000175168 60 ntBASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.29□□□□□ -0.6
Rtp4Q9ER80 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rtp4Q9ER80 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 101.1 ms