Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp4bQ9D8B3 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp4bQ9D8B3 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 AC126257.1-201ENSMUST00000213195 1536 ntBASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Gm44152-201ENSMUST00000205007 1691 ntBASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Gm7722-201ENSMUST00000120646 741 ntBASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Rprl1-202ENSMUST00000198476 238 ntBASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Gm45691-201ENSMUST00000206905 1120 ntBASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Gm6334-201ENSMUST00000207083 228 ntBASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Cts7-204ENSMUST00000225321 1257 ntBASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp4bQ9D8B3 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Gm9796-201ENSMUST00000062249 2250 ntBASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 CT025624.1-201ENSMUST00000224007 2700 ntBASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Gm43760-201ENSMUST00000202120 3015 ntBASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Gm12164-201ENSMUST00000121695 551 ntBASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Gm14381-201ENSMUST00000122105 414 ntBASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Gm32999-201ENSMUST00000192693 562 ntBASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Gm44086-201ENSMUST00000203251 2349 ntBASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Gm6015-201ENSMUST00000217493 1586 ntBASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 AC122371.3-201ENSMUST00000223402 1061 ntBASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp4bQ9D8B3 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 AC091458.1-201ENSMUST00000220902 1361 ntBASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp4bQ9D8B3 Gm18893-201ENSMUST00000198416 943 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms