Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Gm12058-201ENSMUST00000118614 437 ntBASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.37□□□□□ -0.11
Chmp4cQ9D7F7 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Gm24830-201ENSMUST00000102024 166 ntBASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Gm11531-201ENSMUST00000117614 555 ntBASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Gm27023-201ENSMUST00000182372 285 ntBASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Gm42599-201ENSMUST00000201308 469 ntBASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Gm26232-201ENSMUST00000083360 166 ntBASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4cQ9D7F7 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Gm44831-201ENSMUST00000208469 2989 ntBASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Gm43172-201ENSMUST00000202139 2137 ntBASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Gm25214-201ENSMUST00000104573 129 ntBASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Gm24845-201ENSMUST00000158034 109 ntBASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp4cQ9D7F7 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms