Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Gm15547-201ENSMUST00000122152 333 ntBASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Gm31256-201ENSMUST00000194705 506 ntBASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Gm38266-201ENSMUST00000194931 421 ntBASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Gm9899-201ENSMUST00000065519 555 ntBASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Gm10312-201ENSMUST00000078515 489 ntBASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Khdc3Q9CWU5 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Gm14726-201ENSMUST00000120623 896 ntBASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Rprl1-201ENSMUST00000158050 327 ntBASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Gm45865-201ENSMUST00000211815 945 ntBASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Khdc3Q9CWU5 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Khdc3Q9CWU5 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Khdc3Q9CWU5 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Khdc3Q9CWU5 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Khdc3Q9CWU5 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.53□□□□□ -0.56
Khdc3Q9CWU5 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.53□□□□□ -0.56
Khdc3Q9CWU5 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Khdc3Q9CWU5 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Khdc3Q9CWU5 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Khdc3Q9CWU5 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Khdc3Q9CWU5 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Khdc3Q9CWU5 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Khdc3Q9CWU5 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Khdc3Q9CWU5 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms