Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.66
Lims1Q99JW4 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.95□□□□□ -0.66
Lims1Q99JW4 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.95□□□□□ -0.66
Lims1Q99JW4 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lims1Q99JW4 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Lims1Q99JW4 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Gm23931-201ENSMUST00000103842 109 ntBASIC10.95□□□□□ -0.66
Lims1Q99JW4 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Gm11439-201ENSMUST00000118598 409 ntBASIC10.95□□□□□ -0.66
Lims1Q99JW4 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.95□□□□□ -0.66
Lims1Q99JW4 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Gm2546-201ENSMUST00000182630 991 ntBASIC10.95□□□□□ -0.66
Lims1Q99JW4 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Gm5370-201ENSMUST00000187187 574 ntBASIC10.95□□□□□ -0.66
Lims1Q99JW4 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lims1Q99JW4 Cog3-203ENSMUST00000227473 4197 ntBASIC10.95□□□□□ -0.66
Lims1Q99JW4 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.94□□□□□ -0.66
Lims1Q99JW4 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.94□□□□□ -0.66
Lims1Q99JW4 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.94□□□□□ -0.66
Lims1Q99JW4 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.94□□□□□ -0.66
Lims1Q99JW4 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Gm15198-201ENSMUST00000117283 177 ntBASIC10.94□□□□□ -0.66
Lims1Q99JW4 Gm6023-201ENSMUST00000118217 606 ntBASIC10.94□□□□□ -0.66
Lims1Q99JW4 Gm5419-201ENSMUST00000119301 527 ntBASIC10.94□□□□□ -0.66
Lims1Q99JW4 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Lims1Q99JW4 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.94□□□□□ -0.66
Lims1Q99JW4 Gm19087-201ENSMUST00000191430 946 ntBASIC10.94□□□□□ -0.66
Lims1Q99JW4 Gm38158-201ENSMUST00000194617 339 ntBASIC10.94□□□□□ -0.66
Lims1Q99JW4 Gm38314-201ENSMUST00000195709 625 ntBASIC10.94□□□□□ -0.66
Lims1Q99JW4 Gm42627-201ENSMUST00000197347 224 ntBASIC10.94□□□□□ -0.66
Lims1Q99JW4 Gm43179-201ENSMUST00000198797 275 ntBASIC10.94□□□□□ -0.66
Lims1Q99JW4 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.94□□□□□ -0.66
Lims1Q99JW4 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Gm9257-201ENSMUST00000221254 232 ntBASIC10.94□□□□□ -0.66
Lims1Q99JW4 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms