Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb20Q91XZ9 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Gm37057-201ENSMUST00000192624 1916 ntBASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Gm15198-201ENSMUST00000117283 177 ntBASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Gm13492-201ENSMUST00000119772 665 ntBASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Gm19807-201ENSMUST00000173971 667 ntBASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Gm8321-201ENSMUST00000181691 980 ntBASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Gm29396-201ENSMUST00000185659 716 ntBASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Gm37741-201ENSMUST00000191768 1256 ntBASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Gm38266-201ENSMUST00000194931 421 ntBASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Gm18935-201ENSMUST00000212692 664 ntBASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb20Q91XZ9 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Gm13786-201ENSMUST00000122371 333 ntBASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Gm16456-201ENSMUST00000174431 920 ntBASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Mospd4-201ENSMUST00000180618 576 ntBASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms