Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx1Q91V10 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx1Q91V10 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx1Q91V10 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx1Q91V10 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Vsx1Q91V10 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Vsx1Q91V10 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx1Q91V10 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx1Q91V10 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Vsx1Q91V10 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.92□□□□□ -0.5
Vsx1Q91V10 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx1Q91V10 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx1Q91V10 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vsx1Q91V10 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx1Q91V10 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.91□□□□□ -0.5
Vsx1Q91V10 Gm12990-201ENSMUST00000120372 468 ntBASIC11.91□□□□□ -0.5
Vsx1Q91V10 Gm11980-201ENSMUST00000121445 986 ntBASIC11.91□□□□□ -0.5
Vsx1Q91V10 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Gm8343-201ENSMUST00000182705 994 ntBASIC11.91□□□□□ -0.5
Vsx1Q91V10 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Gm28686-201ENSMUST00000187404 609 ntBASIC11.91□□□□□ -0.5
Vsx1Q91V10 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx1Q91V10 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx1Q91V10 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx1Q91V10 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.91□□□□□ -0.5
Vsx1Q91V10 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.91□□□□□ -0.5
Vsx1Q91V10 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vsx1Q91V10 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.9□□□□□ -0.5
Vsx1Q91V10 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.9□□□□□ -0.5
Vsx1Q91V10 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Gm9645-201ENSMUST00000197131 792 ntBASIC11.9□□□□□ -0.5
Vsx1Q91V10 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Gm9111-201ENSMUST00000219394 709 ntBASIC11.9□□□□□ -0.5
Vsx1Q91V10 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.9□□□□□ -0.5
Vsx1Q91V10 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vsx1Q91V10 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Vsx1Q91V10 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.9□□□□□ -0.51
Vsx1Q91V10 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.9□□□□□ -0.51
Vsx1Q91V10 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.9□□□□□ -0.51
Vsx1Q91V10 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms