Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.31□□□□□ -0.44
CopaQ8CIE6 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.31□□□□□ -0.44
CopaQ8CIE6 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CopaQ8CIE6 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopaQ8CIE6 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.31□□□□□ -0.44
CopaQ8CIE6 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CopaQ8CIE6 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.3□□□□□ -0.44
CopaQ8CIE6 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.3□□□□□ -0.44
CopaQ8CIE6 Gm45224-201ENSMUST00000208203 414 ntBASIC12.3□□□□□ -0.44
CopaQ8CIE6 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.3□□□□□ -0.44
CopaQ8CIE6 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CopaQ8CIE6 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CopaQ8CIE6 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CopaQ8CIE6 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Gm7857-201ENSMUST00000117957 358 ntBASIC12.29□□□□□ -0.44
CopaQ8CIE6 Gm12314-201ENSMUST00000118104 538 ntBASIC12.29□□□□□ -0.44
CopaQ8CIE6 Gm15703-201ENSMUST00000120250 880 ntBASIC12.29□□□□□ -0.44
CopaQ8CIE6 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Gm28882-201ENSMUST00000185504 314 ntBASIC12.29□□□□□ -0.44
CopaQ8CIE6 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Gm44651-201ENSMUST00000207343 372 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms