Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
SprnQ8BWU1 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SprnQ8BWU1 Gm13736-201ENSMUST00000119272 253 ntBASIC10.6□□□□□ -0.71
SprnQ8BWU1 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SprnQ8BWU1 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.6□□□□□ -0.71
SprnQ8BWU1 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.6□□□□□ -0.71
SprnQ8BWU1 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.6□□□□□ -0.71
SprnQ8BWU1 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.6□□□□□ -0.71
SprnQ8BWU1 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.6□□□□□ -0.71
SprnQ8BWU1 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.6□□□□□ -0.71
SprnQ8BWU1 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.6□□□□□ -0.71
SprnQ8BWU1 Gm42937-201ENSMUST00000197360 752 ntBASIC10.6□□□□□ -0.71
SprnQ8BWU1 Gm6013-201ENSMUST00000212264 699 ntBASIC10.6□□□□□ -0.71
SprnQ8BWU1 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SprnQ8BWU1 Gm45930-201ENSMUST00000221330 292 ntBASIC10.6□□□□□ -0.71
SprnQ8BWU1 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SprnQ8BWU1 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.6□□□□□ -0.71
SprnQ8BWU1 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
SprnQ8BWU1 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.6□□□□□ -0.71
SprnQ8BWU1 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SprnQ8BWU1 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SprnQ8BWU1 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SprnQ8BWU1 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.6□□□□□ -0.71
SprnQ8BWU1 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SprnQ8BWU1 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.6□□□□□ -0.71
SprnQ8BWU1 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SprnQ8BWU1 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
SprnQ8BWU1 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.6□□□□□ -0.71
SprnQ8BWU1 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SprnQ8BWU1 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
SprnQ8BWU1 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SprnQ8BWU1 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SprnQ8BWU1 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
SprnQ8BWU1 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SprnQ8BWU1 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SprnQ8BWU1 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SprnQ8BWU1 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SprnQ8BWU1 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.59□□□□□ -0.71
SprnQ8BWU1 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Gm23912-201ENSMUST00000104687 87 ntBASIC10.59□□□□□ -0.71
SprnQ8BWU1 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.59□□□□□ -0.71
SprnQ8BWU1 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Gm14441-201ENSMUST00000121960 540 ntBASIC10.59□□□□□ -0.71
SprnQ8BWU1 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Gm27516-201ENSMUST00000184237 98 ntBASIC10.59□□□□□ -0.71
SprnQ8BWU1 Gm38002-201ENSMUST00000193255 180 ntBASIC10.59□□□□□ -0.71
SprnQ8BWU1 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.59□□□□□ -0.71
SprnQ8BWU1 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.59□□□□□ -0.71
SprnQ8BWU1 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.59□□□□□ -0.71
SprnQ8BWU1 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
SprnQ8BWU1 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.59□□□□□ -0.71
SprnQ8BWU1 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.59□□□□□ -0.71
SprnQ8BWU1 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SprnQ8BWU1 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.58□□□□□ -0.71
SprnQ8BWU1 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.71
SprnQ8BWU1 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.71
SprnQ8BWU1 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.58□□□□□ -0.72
SprnQ8BWU1 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SprnQ8BWU1 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SprnQ8BWU1 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.58□□□□□ -0.72
SprnQ8BWU1 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms