Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Gm12857-201ENSMUST00000117678 592 ntBASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Gm7857-201ENSMUST00000117957 358 ntBASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Gm27552-201ENSMUST00000183351 62 ntBASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Gm27844-201ENSMUST00000183613 62 ntBASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atg4dQ8BGV9 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Gm4310-201ENSMUST00000177847 889 ntBASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Gm28450-201ENSMUST00000187349 638 ntBASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Gm5363-201ENSMUST00000211927 938 ntBASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atg4dQ8BGV9 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.16□□□□□ -0.62
Atg4dQ8BGV9 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atg4dQ8BGV9 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atg4dQ8BGV9 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms