Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Gm45428-201ENSMUST00000209619 1789 ntBASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Gm26684-202ENSMUST00000228229 8257 ntBASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Gm13315-201ENSMUST00000120376 991 ntBASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Gm9083-201ENSMUST00000120423 819 ntBASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Gm6013-201ENSMUST00000212264 699 ntBASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ctdp1Q7TSG2 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Mir1247-201ENSMUST00000116706 82 ntBASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Gm27572-201ENSMUST00000183702 255 ntBASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Gm18304-201ENSMUST00000189162 546 ntBASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Gm38002-201ENSMUST00000193255 180 ntBASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Gm42627-201ENSMUST00000197347 224 ntBASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctdp1Q7TSG2 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Ctdp1Q7TSG2 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Ctdp1Q7TSG2 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Gm42463-201ENSMUST00000198041 4886 ntBASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms