Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sp140Q6NSQ5 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Gm12015-201ENSMUST00000117065 843 ntBASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Gm3096-201ENSMUST00000185770 364 ntBASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Gm31256-201ENSMUST00000194705 506 ntBASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Gm45865-201ENSMUST00000211815 945 ntBASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.18□□□□□ -0.46
Sp140Q6NSQ5 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Gm11989-201ENSMUST00000117240 672 ntBASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Gm11362-201ENSMUST00000118838 850 ntBASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Gm5419-201ENSMUST00000119301 527 ntBASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Gm14726-201ENSMUST00000120623 896 ntBASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Gm21769-201ENSMUST00000211922 111 ntBASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms