Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smarca2Q6DIC0 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smarca2Q6DIC0 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smarca2Q6DIC0 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smarca2Q6DIC0 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smarca2Q6DIC0 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smarca2Q6DIC0 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smarca2Q6DIC0 Gm17435-202ENSMUST00000212699 1998 ntBASIC20.52■□□□□ 0.88
Smarca2Q6DIC0 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Smarca2Q6DIC0 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC20.52■□□□□ 0.87
Smarca2Q6DIC0 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Smarca2Q6DIC0 Gm7841-201ENSMUST00000122108 1629 ntBASIC20.52■□□□□ 0.87
Smarca2Q6DIC0 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Smarca2Q6DIC0 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Gm43506-201ENSMUST00000200675 753 ntBASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Gm7192-201ENSMUST00000210793 1137 ntBASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Gm24078-201ENSMUST00000158184 103 ntBASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Gm37365-201ENSMUST00000193109 409 ntBASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Gm43773-201ENSMUST00000198548 2162 ntBASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Gm6653-201ENSMUST00000218063 1288 ntBASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarca2Q6DIC0 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarca2Q6DIC0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarca2Q6DIC0 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarca2Q6DIC0 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarca2Q6DIC0 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarca2Q6DIC0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarca2Q6DIC0 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smarca2Q6DIC0 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smarca2Q6DIC0 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Smarca2Q6DIC0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarca2Q6DIC0 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC20.5■□□□□ 0.87
Smarca2Q6DIC0 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC20.5■□□□□ 0.87
Smarca2Q6DIC0 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC20.5■□□□□ 0.87
Smarca2Q6DIC0 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smarca2Q6DIC0 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smarca2Q6DIC0 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC20.5■□□□□ 0.87
Smarca2Q6DIC0 Mir7035-201ENSMUST00000184713 82 ntBASIC20.5■□□□□ 0.87
Smarca2Q6DIC0 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smarca2Q6DIC0 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smarca2Q6DIC0 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarca2Q6DIC0 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
Smarca2Q6DIC0 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarca2Q6DIC0 Gm45546-201ENSMUST00000211053 2394 ntBASIC20.5■□□□□ 0.87
Smarca2Q6DIC0 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Smarca2Q6DIC0 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Smarca2Q6DIC0 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Smarca2Q6DIC0 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarca2Q6DIC0 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarca2Q6DIC0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Smarca2Q6DIC0 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarca2Q6DIC0 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarca2Q6DIC0 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Smarca2Q6DIC0 Gm25569-201ENSMUST00000157175 131 ntBASIC20.49■□□□□ 0.87
Smarca2Q6DIC0 Gm4982-201ENSMUST00000160440 1098 ntBASIC20.49■□□□□ 0.87
Smarca2Q6DIC0 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Smarca2Q6DIC0 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Smarca2Q6DIC0 AC122035.1-201ENSMUST00000227576 1016 ntBASIC20.49■□□□□ 0.87
Smarca2Q6DIC0 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarca2Q6DIC0 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Smarca2Q6DIC0 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarca2Q6DIC0 Gm18986-201ENSMUST00000216029 1986 ntBASIC20.49■□□□□ 0.87
Smarca2Q6DIC0 Gm45428-201ENSMUST00000209619 1789 ntBASIC20.49■□□□□ 0.87
Smarca2Q6DIC0 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Smarca2Q6DIC0 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smarca2Q6DIC0 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC20.48■□□□□ 0.87
Smarca2Q6DIC0 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarca2Q6DIC0 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Smarca2Q6DIC0 AC108858.2-201ENSMUST00000228186 1425 ntBASIC20.48■□□□□ 0.87
Smarca2Q6DIC0 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarca2Q6DIC0 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarca2Q6DIC0 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms