Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VclQ64727 Gm12997-201ENSMUST00000120207 640 ntBASIC11.85□□□□□ -0.51
VclQ64727 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.85□□□□□ -0.51
VclQ64727 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VclQ64727 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.85□□□□□ -0.51
VclQ64727 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.85□□□□□ -0.51
VclQ64727 Gm27390-201ENSMUST00000184516 176 ntBASIC11.85□□□□□ -0.51
VclQ64727 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.85□□□□□ -0.51
VclQ64727 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VclQ64727 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.85□□□□□ -0.51
VclQ64727 Gm45186-201ENSMUST00000206874 478 ntBASIC11.85□□□□□ -0.51
VclQ64727 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.85□□□□□ -0.51
VclQ64727 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.85□□□□□ -0.51
VclQ64727 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VclQ64727 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VclQ64727 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
VclQ64727 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
VclQ64727 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
VclQ64727 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
VclQ64727 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VclQ64727 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
VclQ64727 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VclQ64727 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.85□□□□□ -0.51
VclQ64727 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VclQ64727 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VclQ64727 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VclQ64727 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
VclQ64727 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
VclQ64727 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.85□□□□□ -0.51
VclQ64727 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.85□□□□□ -0.51
VclQ64727 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VclQ64727 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
VclQ64727 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
VclQ64727 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VclQ64727 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
VclQ64727 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
VclQ64727 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VclQ64727 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VclQ64727 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VclQ64727 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VclQ64727 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VclQ64727 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VclQ64727 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VclQ64727 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VclQ64727 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
VclQ64727 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VclQ64727 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VclQ64727 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
VclQ64727 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VclQ64727 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VclQ64727 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
VclQ64727 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VclQ64727 Gm11439-201ENSMUST00000118598 409 ntBASIC11.84□□□□□ -0.51
VclQ64727 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.84□□□□□ -0.51
VclQ64727 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VclQ64727 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.84□□□□□ -0.51
VclQ64727 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VclQ64727 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.84□□□□□ -0.51
VclQ64727 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
VclQ64727 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
VclQ64727 Gm28071-201ENSMUST00000190355 478 ntBASIC11.84□□□□□ -0.51
VclQ64727 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VclQ64727 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.84□□□□□ -0.51
VclQ64727 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.84□□□□□ -0.51
VclQ64727 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.84□□□□□ -0.51
VclQ64727 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VclQ64727 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VclQ64727 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VclQ64727 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VclQ64727 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
VclQ64727 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.84□□□□□ -0.51
VclQ64727 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VclQ64727 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VclQ64727 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VclQ64727 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.84□□□□□ -0.51
VclQ64727 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
VclQ64727 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VclQ64727 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VclQ64727 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.84□□□□□ -0.51
VclQ64727 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
VclQ64727 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.84□□□□□ -0.51
VclQ64727 Matn2-203ENSMUST00000226766 3252 ntBASIC11.84□□□□□ -0.51
VclQ64727 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
VclQ64727 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
VclQ64727 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
VclQ64727 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.83□□□□□ -0.52
VclQ64727 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.83□□□□□ -0.52
VclQ64727 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
VclQ64727 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
VclQ64727 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
VclQ64727 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VclQ64727 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
VclQ64727 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VclQ64727 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VclQ64727 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VclQ64727 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
VclQ64727 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
VclQ64727 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VclQ64727 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.83□□□□□ -0.52
VclQ64727 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms