Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Foxd4Q60688 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxd4Q60688 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxd4Q60688 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Foxd4Q60688 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxd4Q60688 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxd4Q60688 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Foxd4Q60688 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxd4Q60688 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Foxd4Q60688 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxd4Q60688 Gm15394-201ENSMUST00000119656 1308 ntBASIC12.81□□□□□ -0.36
Foxd4Q60688 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Foxd4Q60688 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxd4Q60688 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxd4Q60688 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Foxd4Q60688 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxd4Q60688 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Foxd4Q60688 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxd4Q60688 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxd4Q60688 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Foxd4Q60688 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.81□□□□□ -0.36
Foxd4Q60688 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxd4Q60688 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxd4Q60688 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Foxd4Q60688 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Foxd4Q60688 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxd4Q60688 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Foxd4Q60688 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxd4Q60688 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Foxd4Q60688 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxd4Q60688 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxd4Q60688 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Foxd4Q60688 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxd4Q60688 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Foxd4Q60688 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.8□□□□□ -0.36
Foxd4Q60688 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxd4Q60688 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Foxd4Q60688 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Foxd4Q60688 Gm5530-201ENSMUST00000117185 985 ntBASIC12.8□□□□□ -0.36
Foxd4Q60688 Gm16149-201ENSMUST00000117631 309 ntBASIC12.8□□□□□ -0.36
Foxd4Q60688 Gm12203-201ENSMUST00000118235 598 ntBASIC12.8□□□□□ -0.36
Foxd4Q60688 Gm12209-201ENSMUST00000120089 596 ntBASIC12.8□□□□□ -0.36
Foxd4Q60688 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Foxd4Q60688 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Foxd4Q60688 Crem-229ENSMUST00000151084 957 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Foxd4Q60688 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.8□□□□□ -0.36
Foxd4Q60688 Gm17075-201ENSMUST00000171924 670 ntBASIC12.8□□□□□ -0.36
Foxd4Q60688 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Foxd4Q60688 Gm29127-201ENSMUST00000188304 517 ntBASIC12.8□□□□□ -0.36
Foxd4Q60688 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.8□□□□□ -0.36
Foxd4Q60688 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.8□□□□□ -0.36
Foxd4Q60688 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.8□□□□□ -0.36
Foxd4Q60688 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.8□□□□□ -0.36
Foxd4Q60688 AC151902.1-201ENSMUST00000227800 375 ntBASIC12.8□□□□□ -0.36
Foxd4Q60688 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxd4Q60688 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Foxd4Q60688 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Foxd4Q60688 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxd4Q60688 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC12.8□□□□□ -0.36
Foxd4Q60688 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxd4Q60688 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxd4Q60688 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxd4Q60688 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Foxd4Q60688 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxd4Q60688 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxd4Q60688 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Foxd4Q60688 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Foxd4Q60688 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxd4Q60688 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxd4Q60688 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Foxd4Q60688 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxd4Q60688 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxd4Q60688 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.79□□□□□ -0.36
Foxd4Q60688 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.79□□□□□ -0.36
Foxd4Q60688 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.79□□□□□ -0.36
Foxd4Q60688 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Foxd4Q60688 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Foxd4Q60688 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.79□□□□□ -0.36
Foxd4Q60688 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxd4Q60688 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Foxd4Q60688 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Foxd4Q60688 Mir669l-201ENSMUST00000103771 98 ntBASIC12.79□□□□□ -0.36
Foxd4Q60688 Mir1247-201ENSMUST00000116706 82 ntBASIC12.79□□□□□ -0.36
Foxd4Q60688 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.79□□□□□ -0.36
Foxd4Q60688 Gm15198-201ENSMUST00000117283 177 ntBASIC12.79□□□□□ -0.36
Foxd4Q60688 Gm15103-201ENSMUST00000119893 871 ntBASIC12.79□□□□□ -0.36
Foxd4Q60688 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Foxd4Q60688 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.79□□□□□ -0.36
Foxd4Q60688 Gm11834-201ENSMUST00000122257 585 ntBASIC12.79□□□□□ -0.36
Foxd4Q60688 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxd4Q60688 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.79□□□□□ -0.36
Foxd4Q60688 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Foxd4Q60688 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC12.79□□□□□ -0.36
Foxd4Q60688 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.79□□□□□ -0.36
Foxd4Q60688 Gm3116-201ENSMUST00000189440 1116 ntBASIC12.79□□□□□ -0.36
Foxd4Q60688 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.79□□□□□ -0.36
Foxd4Q60688 Gm37306-201ENSMUST00000193447 1233 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Foxd4Q60688 Gm38233-201ENSMUST00000194259 807 ntBASIC12.79□□□□□ -0.36
Foxd4Q60688 Gm37724-201ENSMUST00000195240 1221 ntBASIC12.79□□□□□ -0.36
Foxd4Q60688 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms