Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
ClpbQ60649 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
ClpbQ60649 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
ClpbQ60649 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
ClpbQ60649 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
ClpbQ60649 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClpbQ60649 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.56□□□□□ -0.56
ClpbQ60649 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.56□□□□□ -0.56
ClpbQ60649 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.56□□□□□ -0.56
ClpbQ60649 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.56□□□□□ -0.56
ClpbQ60649 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.56□□□□□ -0.56
ClpbQ60649 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.56□□□□□ -0.56
ClpbQ60649 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.56□□□□□ -0.56
ClpbQ60649 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClpbQ60649 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClpbQ60649 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClpbQ60649 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClpbQ60649 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
ClpbQ60649 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
ClpbQ60649 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClpbQ60649 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClpbQ60649 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClpbQ60649 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClpbQ60649 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClpbQ60649 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClpbQ60649 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClpbQ60649 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
ClpbQ60649 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClpbQ60649 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
ClpbQ60649 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
ClpbQ60649 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClpbQ60649 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClpbQ60649 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClpbQ60649 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
ClpbQ60649 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
ClpbQ60649 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClpbQ60649 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClpbQ60649 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.55□□□□□ -0.56
ClpbQ60649 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
ClpbQ60649 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
ClpbQ60649 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClpbQ60649 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClpbQ60649 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClpbQ60649 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClpbQ60649 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.55□□□□□ -0.56
ClpbQ60649 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClpbQ60649 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.55□□□□□ -0.56
ClpbQ60649 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.55□□□□□ -0.56
ClpbQ60649 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.55□□□□□ -0.56
ClpbQ60649 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
ClpbQ60649 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.55□□□□□ -0.56
ClpbQ60649 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClpbQ60649 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
ClpbQ60649 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
ClpbQ60649 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.55□□□□□ -0.56
ClpbQ60649 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClpbQ60649 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClpbQ60649 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClpbQ60649 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClpbQ60649 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.55□□□□□ -0.56
ClpbQ60649 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
ClpbQ60649 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClpbQ60649 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClpbQ60649 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClpbQ60649 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
ClpbQ60649 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClpbQ60649 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClpbQ60649 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
ClpbQ60649 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClpbQ60649 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.55□□□□□ -0.56
ClpbQ60649 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClpbQ60649 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClpbQ60649 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
ClpbQ60649 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
ClpbQ60649 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ClpbQ60649 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
ClpbQ60649 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ClpbQ60649 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ClpbQ60649 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ClpbQ60649 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ClpbQ60649 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ClpbQ60649 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ClpbQ60649 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
ClpbQ60649 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
ClpbQ60649 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
ClpbQ60649 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ClpbQ60649 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
ClpbQ60649 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ClpbQ60649 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
ClpbQ60649 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ClpbQ60649 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
ClpbQ60649 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.54□□□□□ -0.56
ClpbQ60649 Rprl1-202ENSMUST00000198476 238 ntBASIC11.54□□□□□ -0.56
ClpbQ60649 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
ClpbQ60649 Gm18212-201ENSMUST00000211678 889 ntBASIC11.54□□□□□ -0.56
ClpbQ60649 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.54□□□□□ -0.56
ClpbQ60649 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
ClpbQ60649 Gzmn-202ENSMUST00000225535 989 ntBASIC11.54□□□□□ -0.56
ClpbQ60649 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ClpbQ60649 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms