Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Rprl1-201ENSMUST00000158050 327 ntBASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Gm15432-201ENSMUST00000121106 195 ntBASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Gm27390-201ENSMUST00000184516 176 ntBASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Gm2965-201ENSMUST00000198365 343 ntBASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Gm5051-201ENSMUST00000204085 485 ntBASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Gm807-202ENSMUST00000224929 408 ntBASIC12.78□□□□□ -0.36
Shroom1Q5SX79 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shroom1Q5SX79 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Shroom1Q5SX79 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.77□□□□□ -0.36
Shroom1Q5SX79 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.36
Shroom1Q5SX79 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Shroom1Q5SX79 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Shroom1Q5SX79 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Shroom1Q5SX79 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Shroom1Q5SX79 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Shroom1Q5SX79 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Shroom1Q5SX79 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Shroom1Q5SX79 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms