Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC20.91■□□□□ 0.94
Trim41Q5NCC3 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim41Q5NCC3 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC20.91■□□□□ 0.94
Trim41Q5NCC3 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC20.91■□□□□ 0.94
Trim41Q5NCC3 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC20.91■□□□□ 0.94
Trim41Q5NCC3 Gm29763-201ENSMUST00000205306 616 ntBASIC20.91■□□□□ 0.94
Trim41Q5NCC3 Gm45135-201ENSMUST00000206787 1184 ntBASIC20.91■□□□□ 0.94
Trim41Q5NCC3 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim41Q5NCC3 Gm18636-201ENSMUST00000218846 1066 ntBASIC20.91■□□□□ 0.94
Trim41Q5NCC3 AC114573.1-201ENSMUST00000224120 1210 ntBASIC20.91■□□□□ 0.94
Trim41Q5NCC3 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Trim41Q5NCC3 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC20.91■□□□□ 0.94
Trim41Q5NCC3 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim41Q5NCC3 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim41Q5NCC3 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim41Q5NCC3 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim41Q5NCC3 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 AC159195.1-201ENSMUST00000225867 2086 ntBASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Gm18159-201ENSMUST00000174516 1070 ntBASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Gm9116-201ENSMUST00000192400 1018 ntBASIC20.9■□□□□ 0.94
Trim41Q5NCC3 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Gm45310-201ENSMUST00000210436 275 ntBASIC20.9■□□□□ 0.94
Trim41Q5NCC3 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 AC134860.1-201ENSMUST00000224867 660 ntBASIC20.9■□□□□ 0.94
Trim41Q5NCC3 CT025553.1-201ENSMUST00000226292 299 ntBASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim41Q5NCC3 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Trim41Q5NCC3 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim41Q5NCC3 AC126257.1-201ENSMUST00000213195 1536 ntBASIC20.89■□□□□ 0.94
Trim41Q5NCC3 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim41Q5NCC3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Trim41Q5NCC3 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Trim41Q5NCC3 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim41Q5NCC3 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim41Q5NCC3 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim41Q5NCC3 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim41Q5NCC3 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim41Q5NCC3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim41Q5NCC3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC20.89■□□□□ 0.93
Trim41Q5NCC3 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim41Q5NCC3 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim41Q5NCC3 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim41Q5NCC3 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Trim41Q5NCC3 Gm15610-201ENSMUST00000120584 195 ntBASIC20.89■□□□□ 0.93
Trim41Q5NCC3 Defa-ps17-201ENSMUST00000121849 171 ntBASIC20.89■□□□□ 0.93
Trim41Q5NCC3 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC20.89■□□□□ 0.93
Trim41Q5NCC3 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC20.89■□□□□ 0.93
Trim41Q5NCC3 Gm9625-201ENSMUST00000180422 955 ntBASIC20.89■□□□□ 0.93
Trim41Q5NCC3 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim41Q5NCC3 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim41Q5NCC3 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim41Q5NCC3 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim41Q5NCC3 AC129931.1-201ENSMUST00000228865 1861 ntBASIC20.89■□□□□ 0.93
Trim41Q5NCC3 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim41Q5NCC3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim41Q5NCC3 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim41Q5NCC3 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.93
Trim41Q5NCC3 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim41Q5NCC3 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim41Q5NCC3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim41Q5NCC3 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Trim41Q5NCC3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim41Q5NCC3 Gm37844-201ENSMUST00000192473 4097 ntBASIC20.89■□□□□ 0.93
Trim41Q5NCC3 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
Trim41Q5NCC3 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim41Q5NCC3 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim41Q5NCC3 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim41Q5NCC3 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim41Q5NCC3 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trim41Q5NCC3 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trim41Q5NCC3 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim41Q5NCC3 Gm22144-201ENSMUST00000157402 102 ntBASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms