Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Spg11Q3UHA3 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Spg11Q3UHA3 AC158777.1-201ENSMUST00000226216 1724 ntBASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Gm43106-201ENSMUST00000199485 637 ntBASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Gm5040-201ENSMUST00000218609 800 ntBASIC11.01□□□□□ -0.65
Spg11Q3UHA3 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Gm6946-201ENSMUST00000182237 987 ntBASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Gm7525-201ENSMUST00000219425 454 ntBASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Spg11Q3UHA3 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Spg11Q3UHA3 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Spg11Q3UHA3 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Spg11Q3UHA3 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC11□□□□□ -0.65
Spg11Q3UHA3 Gm14247-201ENSMUST00000120950 237 ntBASIC11□□□□□ -0.65
Spg11Q3UHA3 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC11□□□□□ -0.65
Spg11Q3UHA3 Gm43163-201ENSMUST00000196571 442 ntBASIC11□□□□□ -0.65
Spg11Q3UHA3 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
Spg11Q3UHA3 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC11□□□□□ -0.65
Spg11Q3UHA3 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC11□□□□□ -0.65
Spg11Q3UHA3 AC117769.1-201ENSMUST00000224716 1120 ntBASIC11□□□□□ -0.65
Spg11Q3UHA3 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Spg11Q3UHA3 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Spg11Q3UHA3 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Spg11Q3UHA3 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC11□□□□□ -0.65
Spg11Q3UHA3 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Spg11Q3UHA3 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Spg11Q3UHA3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11□□□□□ -0.65
Spg11Q3UHA3 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Spg11Q3UHA3 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Spg11Q3UHA3 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Spg11Q3UHA3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Spg11Q3UHA3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Spg11Q3UHA3 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Spg11Q3UHA3 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11□□□□□ -0.65
Spg11Q3UHA3 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Spg11Q3UHA3 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Spg11Q3UHA3 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Spg11Q3UHA3 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11□□□□□ -0.65
Spg11Q3UHA3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11□□□□□ -0.65
Spg11Q3UHA3 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Spg11Q3UHA3 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11□□□□□ -0.65
Spg11Q3UHA3 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC11□□□□□ -0.65
Spg11Q3UHA3 Gm8459-201ENSMUST00000162504 760 ntBASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms