Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Thbs3Q05895 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Thbs3Q05895 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.57□□□□□ -0.72
Thbs3Q05895 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Thbs3Q05895 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Thbs3Q05895 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Thbs3Q05895 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.56□□□□□ -0.72
Thbs3Q05895 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Thbs3Q05895 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.56□□□□□ -0.72
Thbs3Q05895 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 Gm11511-201ENSMUST00000118146 540 ntBASIC10.56□□□□□ -0.72
Thbs3Q05895 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.56□□□□□ -0.72
Thbs3Q05895 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.56□□□□□ -0.72
Thbs3Q05895 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.56□□□□□ -0.72
Thbs3Q05895 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Thbs3Q05895 Gm25700-201ENSMUST00000177693 110 ntBASIC10.56□□□□□ -0.72
Thbs3Q05895 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.56□□□□□ -0.72
Thbs3Q05895 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.56□□□□□ -0.72
Thbs3Q05895 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 Gm5455-201ENSMUST00000058710 715 ntBASIC10.56□□□□□ -0.72
Thbs3Q05895 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Thbs3Q05895 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.56□□□□□ -0.72
Thbs3Q05895 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.56□□□□□ -0.72
Thbs3Q05895 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.56□□□□□ -0.72
Thbs3Q05895 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.56□□□□□ -0.72
Thbs3Q05895 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.56□□□□□ -0.72
Thbs3Q05895 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Thbs3Q05895 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Thbs3Q05895 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.55□□□□□ -0.72
Thbs3Q05895 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Thbs3Q05895 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Thbs3Q05895 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Thbs3Q05895 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Thbs3Q05895 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Thbs3Q05895 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Thbs3Q05895 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Thbs3Q05895 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Thbs3Q05895 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.55□□□□□ -0.72
Thbs3Q05895 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Thbs3Q05895 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Thbs3Q05895 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Thbs3Q05895 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Thbs3Q05895 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Thbs3Q05895 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Thbs3Q05895 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Thbs3Q05895 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.55□□□□□ -0.72
Thbs3Q05895 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Thbs3Q05895 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Thbs3Q05895 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.55□□□□□ -0.72
Thbs3Q05895 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Thbs3Q05895 Gm18893-201ENSMUST00000198416 943 ntBASIC10.55□□□□□ -0.72
Thbs3Q05895 Gm8956-201ENSMUST00000203939 825 ntBASIC10.55□□□□□ -0.72
Thbs3Q05895 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.55□□□□□ -0.72
Thbs3Q05895 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Thbs3Q05895 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Thbs3Q05895 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Thbs3Q05895 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.55□□□□□ -0.72
Thbs3Q05895 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Thbs3Q05895 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Thbs3Q05895 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.55□□□□□ -0.72
Thbs3Q05895 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.55□□□□□ -0.72
Thbs3Q05895 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Thbs3Q05895 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Thbs3Q05895 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Thbs3Q05895 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Thbs3Q05895 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Thbs3Q05895 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Thbs3Q05895 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.55□□□□□ -0.72
Thbs3Q05895 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Thbs3Q05895 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Thbs3Q05895 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Thbs3Q05895 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms